RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CDKN2CP42773 168 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 ZFP36L2P47974 494 aaKnown RBP14.64□□□□□ -0.07
CD28-203ENST00000458610 SUMO3P55854 103 aaPredicted RBP14.64□□□□□ -0.07
CD28-203ENST00000458610 GNA13Q14344 377 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 ZNF141Q15928 474 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 HSPB2Q16082 182 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 GPAT3Q53EU6 434 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 AGKQ53H12 422 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 NSUN5P2Q63ZY6 315 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 RTL6Q6ICC9 239 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 MARVELD2Q8N4S9 558 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 MEIOBQ8N635 442 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 ZNF614Q8N883 585 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 GATSQ8NAP1 163 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 LILRB4Q8NHJ6 448 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 ZFP90Q8TF47 636 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 VPS33AQ96AX1 596 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 SPDL1Q96EA4 605 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 THOC1Q96FV9 657 aaKnown RBP14.64□□□□□ -0.07
CD28-203ENST00000458610 TRNT1Q96Q11 434 aaKnown RBP14.64□□□□□ -0.07
CD28-203ENST00000458610 ZNF350Q9GZX5 532 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 TPT1P8Q9HAU6 139 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 RNF6Q9Y252 685 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 FAM215AQ9Y5M1 114 aa14.64□□□□□ -0.07
CD28-203ENST00000458610 NUP214P35658 2090 aaPredicted RBP14.64□□□□□ -0.07
CD28-203ENST00000458610 USP9XQ93008 2570 aaPredicted RBP14.63□□□□□ -0.07
CD28-203ENST00000458610 A0A096LPI6 279 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 SERINC4A6NH21 518 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 HMGN4O00479 90 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 ZNF264O43296 627 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 FCMRO60667 390 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 NR2F1P10589 423 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 ZNF708P17019 499 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 ZNF17P17021 662 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 POU3F2P20265 443 aaPredicted RBP14.63□□□□□ -0.07
CD28-203ENST00000458610 PPIBP23284 216 aaKnown RBP14.63□□□□□ -0.07
CD28-203ENST00000458610 HTR1EP28566 365 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 TIMP3P35625 211 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 ADH7P40394 386 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 MDH1P40925 334 aaKnown RBP14.63□□□□□ -0.07
CD28-203ENST00000458610 P2RX1P51575 399 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 CASP9P55211 416 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 SRYQ05066 204 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 ACSF3Q4G176 576 aaPredicted RBP14.63□□□□□ -0.07
CD28-203ENST00000458610 ZNF619Q8N2I2 560 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 TOR1AIP2Q8NFQ8 470 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 RFWD2Q8NHY2 731 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 TSPEARQ8WU66 669 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 GTF2H4Q92759 462 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 SH3YL1Q96HL8 342 aaPredicted RBP14.63□□□□□ -0.07
CD28-203ENST00000458610 TRIB1Q96RU8 372 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 SAP130Q9H0E3 1048 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 CCDC134Q9H6E4 229 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 MTHFD2LQ9H903 347 aaPredicted RBP14.63□□□□□ -0.07
CD28-203ENST00000458610 KCNJ16Q9NPI9 418 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 CALML5Q9NZT1 146 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 MKLN1Q9UL63 735 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 AP4B1Q9Y6B7 739 aa14.63□□□□□ -0.07
CD28-203ENST00000458610 A0A1W2PP18 115 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 OR2M5A3KFT3 312 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 C7orf72A4D263 438 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 NR5A2O00482 541 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 NUDT14O95848 222 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 UBL4AP11441 157 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 TCEA1P23193 301 aaKnown RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 CRATP43155 626 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 STARP49675 285 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 LHX2P50458 406 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 ARFIP2P53365 341 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 B3GALT5-AS1P59052 145 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 RPS3AP61247 264 aaKnown RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 EEF1A1P68104 462 aaKnown RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 GUCY1A3Q02108 690 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 CD226Q15762 336 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 EEF1A1P5Q5VTE0 462 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 SP5Q6BEB4 398 aaPredicted RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 DNAJC14Q6Y2X3 702 aaPredicted RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 LRRC74BQ6ZQY2 392 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 NCCRP1Q6ZVX7 275 aaPredicted RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 EIF3MQ7L2H7 374 aaKnown RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 FUNDC1Q8IVP5 155 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 TM9SF2Q99805 663 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 CACYBPQ9HB71 228 aaKnown RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.62□□□□□ -0.07
CD28-203ENST00000458610 FGFR1OP2Q9NVK5 253 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 VDAC3Q9Y277 283 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 SLC35A3Q9Y2D2 325 aa14.62□□□□□ -0.07
CD28-203ENST00000458610 DOPEY1Q5JWR5 2465 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 NPIPA5A0A0B4J1W7 369 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 C17orf51A8MQB3 221 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 NPIPA7E9PJI5 369 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 GMFGO60234 142 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 KIAA0513O60268 411 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 UGT2B17O75795 530 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 CSTAP01040 98 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 NPIPA8P0DM63 369 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 ME2P23368 584 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 ADH6P28332 368 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 DSTNP60981 165 aa14.61□□□□□ -0.07
CD28-203ENST00000458610 PDZK1Q5T2W1 519 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms