RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 FLYWCH1Q4VC44 716 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 KLHL26Q53HC5 615 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 AP1ARQ63HQ0 302 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 NSUN5P2Q63ZY6 315 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 SEM1Q6ZVN7 128 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 MTERF4Q7Z6M4 381 aaKnown RBP15.7■□□□□ 0.1
USP39-208ENST00000455732 OIT3Q8WWZ8 545 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 SPOCK3Q9BQ16 436 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 EBF4Q9BQW3 602 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 INPP5KQ9BT40 448 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 TRIM8Q9BZR9 551 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 UCK2Q9BZX2 261 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 ZNF350Q9GZX5 532 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 EXD2Q9NVH0 621 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 Q9UFV3 132 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 A0A087WZY1 265 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 FAM234BA2RU67 622 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 NKX2-6A6NCS4 301 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 RFXANKO14593 260 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 EDF1O60869 148 aaKnown RBP15.69■□□□□ 0.1
USP39-208ENST00000455732 ZNF708P17019 499 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 IGFBP2P18065 325 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 HK1P19367 917 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 TIMP3P35625 211 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 CHI3L1P36222 383 aaPredicted RBP15.69■□□□□ 0.1
USP39-208ENST00000455732 CDKN2CP42773 168 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 MAGEA8P43361 318 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 POLR2JP52435 117 aaKnown RBP15.69■□□□□ 0.1
USP39-208ENST00000455732 ATP12AP54707 1039 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 CLDN18P56856 261 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 STX1BP61266 288 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 CD226Q15762 336 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 TMEM44Q2T9K0 475 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 ATAD3BQ5T9A4 648 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 RAET1LQ5VY80 246 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 ADGRE4PQ86SQ3 457 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 ZNF295-AS1Q8N0V1 137 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 OR10Q1Q8NGQ4 319 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 OR9I1Q8NGQ6 314 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 UCN2Q96RP3 112 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 PIGQQ9BRB3 760 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 SIKE1Q9BRV8 207 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 RMND5AQ9H871 391 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 NPDC1Q9NQX5 325 aaPredicted RBP15.69■□□□□ 0.1
USP39-208ENST00000455732 POLE3Q9NRF9 147 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 TMEM45AQ9NWC5 275 aa15.69■□□□□ 0.1
USP39-208ENST00000455732 RPH3AQ9Y2J0 694 aaPredicted RBP15.69■□□□□ 0.1
USP39-208ENST00000455732 UQCRHLA0A096LP55 91 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 C7orf72A4D263 438 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 FAM90A27PA6NNH2 459 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 KDM4EB2RXH2 506 aaPredicted RBP15.68■□□□□ 0.1
USP39-208ENST00000455732 STX11O75558 287 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 ZCCHC18P0CG32 403 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 OR12D1P0DN82 309 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 ZNF17P17021 662 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 CEACAM8P31997 349 aaPredicted RBP15.68■□□□□ 0.1
USP39-208ENST00000455732 ATP4BP51164 291 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 SUMO3P55854 103 aaPredicted RBP15.68■□□□□ 0.1
USP39-208ENST00000455732 RCAN2Q14206 197 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.68■□□□□ 0.1
USP39-208ENST00000455732 TNFAIP8L2Q6P589 184 aaPredicted RBP15.68■□□□□ 0.1
USP39-208ENST00000455732 C16orf62Q7Z3J2 963 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 GDF7Q7Z4P5 450 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 LIX1LQ8IVB5 337 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 GATSQ8NAP1 163 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 CALHM2Q9HA72 323 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 KCNJ16Q9NPI9 418 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 MED4Q9NPJ6 270 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 DTNAQ9Y4J8 743 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 POLQO75417 2590 aa15.68■□□□□ 0.1
USP39-208ENST00000455732 NPIPA5A0A0B4J1W7 369 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 OR2M5A3KFT3 312 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 MBD3L4A6NDZ8 208 aaPredicted RBP15.67■□□□□ 0.1
USP39-208ENST00000455732 MBD3L3A6NE82 208 aaPredicted RBP15.67■□□□□ 0.1
USP39-208ENST00000455732 MBD3L5A6NJ08 208 aaPredicted RBP15.67■□□□□ 0.1
USP39-208ENST00000455732 HSPB2A8KAH6 182 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 NPIPA7E9PJI5 369 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 H0Y3Z8 333 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 H3BNH8 94 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 HMGN4O00479 90 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 KIAA0513O60268 411 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 NPIPA8P0DM63 369 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 PEPDP12955 493 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 ANXA11P50995 505 aaKnown RBP15.67■□□□□ 0.1
USP39-208ENST00000455732 FUT5Q11128 374 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 ZNF141Q15928 474 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 HSPB2Q16082 182 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 TIGD2Q4W5G0 525 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 ARSKQ6UWY0 536 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 ZNF621Q6ZSS3 439 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 RNF130Q86XS8 419 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 GTPBP8Q8N3Z3 284 aaPredicted RBP15.67■□□□□ 0.1
USP39-208ENST00000455732 ARFGAP2Q8N6H7 521 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 B4GALNT2Q8NHY0 566 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 MBD3L2Q8NHZ7 208 aaPredicted RBP15.67■□□□□ 0.1
USP39-208ENST00000455732 XAGE5Q8WWM1 108 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 ZBTB8AQ96BR9 441 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 ITCHQ96J02 903 aa15.67■□□□□ 0.1
USP39-208ENST00000455732 TUBA1CQ9BQE3 449 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms