RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 DIRAS1O95057 198 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 RCBTB2O95199 551 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 GASTP01350 101 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 HEXBP07686 556 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CTSBP07858 339 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 UBL4AP11441 157 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 MSX1P28360 303 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SSTR4P31391 388 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 OR1D4P47884 311 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 EMP2P54851 167 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC26A5P58743 744 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC35A2P78381 396 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CDK5Q00535 292 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 IL5RAQ01344 420 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ID2Q02363 134 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 RAPSNQ13702 412 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 EBPQ15125 230 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ZIK1Q3SY52 487 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SNAP47Q5SQN1 464 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 FNDC7Q5VTL7 733 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CDCP2Q5VXM1 449 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CASP12Q6UXS9 341 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 NPSR1Q6W5P4 371 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 LINC00114Q6XXX2 140 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 GDF7Q7Z4P5 450 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 GPR141Q7Z602 305 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 HS3ST5Q8IZT8 346 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 OR4D11Q8NGI4 311 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 VANGL1Q8TAA9 524 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 BRIX1Q8TDN6 353 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 LIPHQ8WWY8 451 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC38A2Q96QD8 506 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 NODALQ96S42 347 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SECISBP2Q96T21 854 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 LPAR4Q99677 370 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 WWTR1Q9GZV5 400 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ARRDC1-AS1Q9H2J1 176 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 FN3KQ9H479 309 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 MRPS18AQ9NVS2 196 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 MKL2Q9ULH7 1088 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 MED31Q9Y3C7 131 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 COMMD3-BMI1R4GMX3 469 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 FER1L5A0AVI2 2057 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 A0A0B4J2E0 115 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 A0A1B0GX12 115 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ALG1L2C9J202 215 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 MEN1O00255 615 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 IDH3BO43837 385 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 TSPAN2O60636 221 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 BCAS1O75363 584 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ICAM2P13598 275 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 GABRB1P18505 474 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CHMP24386 653 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 GRK5P34947 590 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 HTR3AP46098 478 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 OMPP47874 163 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 TMBIM6P55061 237 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 COPZ1P61923 177 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 TARDBPQ13148 414 aaKnown RBP eCLIP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 PIN1Q13526 163 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 PTGES3Q15185 160 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 OR1Q1Q15612 314 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 MINDY4Q4G0A6 757 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 DCAF12Q5T6F0 453 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 PHF19Q5T6S3 580 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 WBP2NLQ6ICG8 309 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 PWWP2BQ6NUJ5 590 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC27A4Q6P1M0 643 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 LINC00299Q6ZSB3 139 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CPEB2Q7Z5Q1 589 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ANKRD37Q7Z713 158 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CLIP4Q8N3C7 705 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 TEX47Q8TBZ9 253 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 M1APQ8TC57 530 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 RHBDD1Q8TEB9 315 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 RNF138Q8WVD3 245 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 RFKQ969G6 155 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ARSGQ96EG1 525 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 TAAR9Q96RI9 348 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SIGLEC11Q96RL6 698 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 YIPF2Q9BWQ6 316 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 GTPBP2Q9BX10 602 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM9BQ9NQ34 198 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SDHAF3Q9NRP4 125 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 PNO1Q9NRX1 252 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 DNAJB12Q9NXW2 375 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 DHCR7Q9UBM7 475 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 PSORS1C1Q9UIG5 152 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 ICAM5Q9UMF0 924 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 RPL36Q9Y3U8 105 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CDH10Q9Y6N8 788 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 NCOR1O75376 2440 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 CUL9Q8IWT3 2517 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 A0A087WUU8 490 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 GXYLT2A0PJZ3 443 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CLCA1A8K7I4 914 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 A8MU76 341 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 IDSB3KWA1 339 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms