RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 IGLV3-16A0A075B6K0 115 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 M0QXV9 152 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 GRID2O43424 1007 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 NME2P1O60361 137 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 RNASEH1O60930 286 aaKnown RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CEACAM5P06731 702 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ANXA4P09525 319 aaPredicted RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 HLA-DMAP28067 261 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CSNK1G2P78368 415 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 PLAURQ03405 335 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ATP13A5Q4VNC0 1218 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 PPM1LQ5SGD2 360 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 IRAK1BP1Q5VVH5 260 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 UGT3A1Q6NUS8 523 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 TRIM46Q7Z4K8 759 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ISCA2Q86U28 154 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ALYREFQ86V81 257 aaKnown RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 SATL1Q86VE3 508 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 TMEM123Q8N131 208 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CFAP52Q8N1V2 620 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 PELI3Q8N2H9 469 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 SMPDL3AQ92484 453 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 RIT1Q92963 219 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 TMEM45BQ96B21 275 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 SLC22A12Q96S37 553 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 NMUR2Q9GZQ4 415 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 SLC22A4Q9H015 551 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ZCCHC4Q9H5U6 513 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CAB39LQ9H9S4 337 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 UBTD1Q9HAC8 227 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CHMP1AQ9HD42 196 aaPredicted RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CMTM6Q9NX76 183 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 PSMD13Q9UNM6 376 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 SLC27A6Q9Y2P4 619 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ACTL7AQ9Y615 435 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 A8MT66 165 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 C9orf172C9J069 976 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 GAPDHSO14556 408 aaPredicted RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 GPC4O75487 556 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 TOP3BO95985 862 aaKnown RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CYBBP04839 570 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 HBQ1P09105 142 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ITGAXP20702 1163 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 TCEA1P23193 301 aaKnown RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 MSX1P28360 303 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 PRDX2P32119 198 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CDKN2DP55273 166 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 LSM11P83369 360 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 GRIK2Q13002 908 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ASPHD2Q6ICH7 369 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 RNASEKQ6P5S7 137 aaKnown RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 DLEU7Q6UYE1 221 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 HACD2Q6Y1H2 254 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 GLT6D1Q7Z4J2 308 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 SLCO6A1Q86UG4 719 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 KLHDC8AQ8IYD2 350 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CMTM8Q8IZV2 173 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 LRRC75A-AS1Q8N1F1 130 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 PARP8Q8N3A8 854 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 C1orf52Q8N6N3 182 aaKnown RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 FAM47BQ8NA70 645 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 TXNDC5Q8NBS9 432 aaKnown RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ACOT11Q8WXI4 607 aaPredicted RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 ASB15Q8WXK1 588 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 CDCA3Q99618 268 aaPredicted RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 NEURL2Q9BR09 285 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 SLC46A2Q9BY10 475 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 GSTO2Q9H4Y5 243 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 APMAPQ9HDC9 416 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 FBXO6Q9NRD1 293 aaPredicted RBP7.24□□□□□ -1.25
BRCC3-208ENST00000453705 TCFL5Q9UL49 500 aa7.24□□□□□ -1.25
BRCC3-208ENST00000453705 A0A0G2JND7 137 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.23□□□□□ -1.25
BRCC3-208ENST00000453705 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.23□□□□□ -1.25
BRCC3-208ENST00000453705 TMEM89A2RUT3 159 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 DCDC2BA2VCK2 349 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 MBD3L4A6NDZ8 208 aaPredicted RBP7.23□□□□□ -1.25
BRCC3-208ENST00000453705 MBD3L3A6NE82 208 aaPredicted RBP7.23□□□□□ -1.25
BRCC3-208ENST00000453705 P2RY10O00398 339 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 GSC2O15499 205 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 SLC43A1O75387 559 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 CBX6O95503 412 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 CBSLP0DN79 551 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 MSR1P21757 451 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 CBSP35520 551 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 RHOAP61586 193 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 SNRPD1P62314 119 aaKnown RBP7.23□□□□□ -1.25
BRCC3-208ENST00000453705 NAAAQ02083 359 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 ZFP36L1Q07352 338 aaKnown RBP7.23□□□□□ -1.25
BRCC3-208ENST00000453705 SERTAD2Q14140 314 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 SSX2Q16385 188 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 ZNF789Q5FWF6 425 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 SLC25A53Q5H9E4 307 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 ZMAT1Q5H9K5 638 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 TCHHL1Q5QJ38 904 aaPredicted RBP7.23□□□□□ -1.25
BRCC3-208ENST00000453705 C6orf10Q5SRN2 563 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 ZNF678Q5SXM1 525 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 PHF19Q5T6S3 580 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 TXNDC8Q6A555 127 aa7.23□□□□□ -1.25
BRCC3-208ENST00000453705 TMEM207Q6UWW9 146 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms