RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HEATR5AQ86XA9 2040 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 UQCRHLA0A096LP55 91 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 WDR91A4D1P6 747 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 SHISA8B8ZZ34 492 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 EIF1AYO14602 144 aaKnown RBP11.6□□□□□ -0.55
CHD3-206ENST00000452447 ERLIN1O75477 346 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 SOX30O94993 753 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 C6orf47O95873 294 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 KRT16P08779 473 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 G6PDP11413 515 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 FCGR2AP12318 317 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 ME2P23368 584 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 EIF1AXP47813 144 aaKnown RBP11.6□□□□□ -0.55
CHD3-206ENST00000452447 FGFBP1Q14512 234 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 CDC73Q6P1J9 531 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 VWA1Q6PCB0 445 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 BTLAQ7Z6A9 289 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 ZAR1Q86SH2 424 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 WDR75Q8IWA0 830 aaKnown RBP11.6□□□□□ -0.55
CHD3-206ENST00000452447 METTL25Q8N6Q8 603 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 CHDHQ8NE62 594 aaPredicted RBP11.6□□□□□ -0.55
CHD3-206ENST00000452447 OR56A1Q8NGH5 318 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 ACTRT2Q8TDY3 377 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 CDS1Q92903 461 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 ZBTB8AQ96BR9 441 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 COQ8BQ96D53 544 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 CENPHQ9H3R5 247 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 RNF122Q9H9V4 155 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 FBXO34Q9NWN3 711 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 GIN1Q9NXP7 522 aa11.6□□□□□ -0.55
CHD3-206ENST00000452447 A0A1W2PQD3 144 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 SERPINE1P05121 402 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 KIR2DL2P43627 348 aaPredicted RBP11.59□□□□□ -0.55
CHD3-206ENST00000452447 KCNJ5P48544 419 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 EMX2Q04743 252 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 ZNF844Q08AG5 666 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 FAM27E3Q08E93 113 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 KEAP1Q14145 624 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 CHI3L2Q15782 390 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 TMEM44Q2T9K0 475 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 PGS1Q32NB8 556 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 BHLHB9Q6PI77 547 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 GTPBP8Q8N3Z3 284 aaPredicted RBP11.59□□□□□ -0.55
CHD3-206ENST00000452447 ZNF527Q8NB42 609 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 B4GALNT2Q8NHY0 566 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 PSMA8Q8TAA3 256 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 MOAP1Q96BY2 351 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 PPP1R36Q96LQ0 422 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 SLC39A3Q9BRY0 314 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 DUSP26Q9BV47 211 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 BHLHE41Q9C0J9 482 aaPredicted RBP11.59□□□□□ -0.55
CHD3-206ENST00000452447 HOXD1Q9GZZ0 328 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 CXorf36Q9H7Y0 433 aa11.59□□□□□ -0.55
CHD3-206ENST00000452447 PAQR5Q9NXK6 330 aaPredicted RBP11.59□□□□□ -0.55
CHD3-206ENST00000452447 NOP53Q9NZM5 478 aaKnown RBP11.59□□□□□ -0.55
CHD3-206ENST00000452447 FLNAP21333 2647 aaKnown RBP11.59□□□□□ -0.55
CHD3-206ENST00000452447 H3BNH8 94 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 TM9SF1O15321 606 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 BIRC5O15392 142 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 ITM2AO43736 263 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 PLGP00747 810 aaPredicted RBP11.58□□□□□ -0.55
CHD3-206ENST00000452447 MYZAPP0CAP1 466 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 SOAT1P35610 550 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 CD79BP40259 229 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 ABCE1P61221 599 aaKnown RBP11.58□□□□□ -0.55
CHD3-206ENST00000452447 RAC1P63000 192 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 POU4F3Q15319 338 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 PDCD2Q16342 344 aaPredicted RBP11.58□□□□□ -0.55
CHD3-206ENST00000452447 PLPPR5Q32ZL2 321 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 EXOSC6Q5RKV6 272 aaKnown RBP11.58□□□□□ -0.55
CHD3-206ENST00000452447 PAMR1Q6UXH9 720 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 CAMKMTQ7Z624 323 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 MTERF4Q7Z6M4 381 aaKnown RBP11.58□□□□□ -0.55
CHD3-206ENST00000452447 GGNQ86UU5 652 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 RIMKLAQ8IXN7 391 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 PHOSPHO1Q8TCT1 267 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 SFXN5Q8TD22 340 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 NUDT8Q8WV74 236 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 RNF145Q96MT1 663 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 ZIM3Q96PE6 472 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 OPN3Q9H1Y3 402 aaPredicted RBP11.58□□□□□ -0.55
CHD3-206ENST00000452447 MED17Q9NVC6 651 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 ELOVL5Q9NYP7 299 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 ZNF226Q9NYT6 803 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 MCTS1Q9ULC4 181 aaKnown RBP11.58□□□□□ -0.55
CHD3-206ENST00000452447 PROCRQ9UNN8 238 aa11.58□□□□□ -0.55
CHD3-206ENST00000452447 C7orf72A4D263 438 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 AQP8O94778 261 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 SNUPNO95149 360 aaKnown RBP11.58□□□□□ -0.56
CHD3-206ENST00000452447 SYNGR4O95473 234 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 NUDT14O95848 222 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 RAF1P04049 648 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 HRGP04196 525 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 CD8BP10966 210 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 POU2F1P14859 743 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 EIF1P41567 113 aaKnown RBP11.58□□□□□ -0.56
CHD3-206ENST00000452447 PCYT1AP49585 367 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 CLDN8P56748 225 aa11.58□□□□□ -0.56
CHD3-206ENST00000452447 RIPPLY3P57055 190 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms