RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 SNRPBP14678 240 aaKnown RBP16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 PBLDP30039 288 aaPredicted RBP16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 TAS2R41P59536 307 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 ERVFC1P60507 584 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 SIM1P81133 766 aaPredicted RBP16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 DYRK1AQ13627 763 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 GDPD4Q6W3E5 623 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 SLC9B2Q86UD5 537 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 CPOQ8IVL8 374 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 TCEAL8Q8IYN2 117 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 TRAM1L1Q8N609 369 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 ACBD7Q8N6N7 88 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 EXOSC8Q96B26 276 aaKnown RBP16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 JAM3Q9BX67 310 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 OR10A4Q9H209 315 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 TTYH1Q9H313 450 aaPredicted RBP16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 MRPL17Q9NRX2 175 aaKnown RBP16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 CA10Q9NS85 328 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 MCRIP1C9JLW8 97 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 E9PI62 339 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 J3QRE1 110 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 PLATP00750 562 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 NAT2P11245 290 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 HOXB3P14651 431 aaPredicted RBP16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 GJA1P17302 382 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 PPP2R1BP30154 601 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 CBX5P45973 191 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 E2F1Q01094 437 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 SLC3A1Q07837 685 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 ASPGQ86U10 573 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 TMEM99Q8N816 258 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 ZFPM2Q8WW38 1151 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 AHCYL2Q96HN2 611 aaKnown RBP16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 NPAS1Q99742 590 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 SAV1Q9H4B6 383 aaPredicted RBP16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 RNF186Q9NXI6 227 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 ENTPD4Q9Y227 616 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 PRELID3BQ9Y3B1 194 aa16.02■□□□□ 0.15
SCUBE2-202ENST00000450649 B3GALNT1O75752 331 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 GDNFP39905 211 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 OMPP47874 163 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SLC7A9P82251 487 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 PGGHGQ32M88 737 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 HENMT1Q5T8I9 393 aaKnown RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 NXPE4Q6UWF7 544 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 DGLUCYQ7Z3D6 616 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 ABHD4Q8TB40 342 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 OSTF1Q92882 214 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SMAD5Q99717 465 aaKnown RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SEC22CQ9BRL7 303 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 TEX12Q9BXU0 123 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 TRIM36Q9NQ86 728 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 ZNF275Q9NSD4 429 aaPredicted RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SLC25A13Q9UJS0 675 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 GMEB2Q9UKD1 530 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 CASP8AP2Q9UKL3 1982 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 ANXA2P2A6NMY6 339 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 AIPO00170 330 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 MID1O15344 667 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 PRAF2O60831 178 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 GATBO75879 557 aaKnown RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 RB1P06400 928 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 CTSAP10619 480 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 CCR8P51685 355 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 HTR4Q13639 388 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 HLXQ14774 488 aaPredicted RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 METTL11BQ5VVY1 283 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 Q6ZVU0 165 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 IZUMO1Q8IYV9 350 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 RASGEF1AQ8N9B8 481 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SCARB1Q8WTV0 552 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SLC5A11Q8WWX8 675 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 TM4SF18Q96CE8 201 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 LCORQ96JN0 433 aaPredicted RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 DPH7Q9BTV6 452 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 RIOK2Q9BVS4 552 aaKnown RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 HMX1Q9NP08 348 aaPredicted RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 OR6C65A6NJZ3 312 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 PLPP1O14494 284 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 GRM6O15303 877 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 FRS3O43559 492 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 C1orf105O95561 183 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 GABRR2P28476 465 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 PCBP4P57723 403 aaKnown RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 PIP5KL1Q5T9C9 394 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SORCS1Q8WY21 1168 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 WDR89Q96FK6 387 aaPredicted RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 SLC35G5Q96KT7 338 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 QRSL1Q9H0R6 528 aaKnown RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 NFKBIL1Q9UBC1 381 aaPredicted RBP16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 CPNE7Q9UBL6 633 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 CA5BQ9Y2D0 317 aa16.01■□□□□ 0.15
SCUBE2-202ENST00000450649 GOLGA4Q13439 2230 aaKnown RBP16■□□□□ 0.15
SCUBE2-202ENST00000450649 CPSF4LA6NMK7 179 aaKnown RBP16■□□□□ 0.15
SCUBE2-202ENST00000450649 PRR23D1E9PI22 279 aaPredicted RBP16■□□□□ 0.15
SCUBE2-202ENST00000450649 DNASE2O00115 360 aaPredicted RBP16■□□□□ 0.15
SCUBE2-202ENST00000450649 LDOC1O95751 146 aaPredicted RBP16■□□□□ 0.15
SCUBE2-202ENST00000450649 APOC3P02656 99 aa16■□□□□ 0.15
SCUBE2-202ENST00000450649 CHRM4P08173 479 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms