RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ADAM29Q9UKF5 820 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 FIS1Q9Y3D6 152 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 E5RJQ4 531 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TP73O15350 636 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 ZNF208O43345 1280 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CACNG3O60359 315 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 ENDOD1O94919 500 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TNFSF15O95150 251 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 GIMD1P0DJR0 217 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TBXA2RP21731 343 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 GABRA2P47869 451 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TTPAP49638 278 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 PTTG1IPP53801 180 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 IL2P60568 153 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CRADDP78560 199 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 LMAN2Q12907 356 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 ZNF311Q5JNZ3 666 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 DCST1Q5T197 706 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 B3GNT9Q6UX72 402 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 REM2Q8IYK8 340 aaPredicted RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 OR51D1Q8NGF3 324 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 OR56A1Q8NGH5 318 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SMIM4Q8WVI0 70 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SHDQ96IW2 340 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CASD1Q96PB1 797 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SERINC2Q96SA4 455 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 GAS2L1Q99501 681 aaPredicted RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 GDF15Q99988 308 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 MTIF3Q9H2K0 278 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 KCNK12Q9HB15 430 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SLC6A20Q9NP91 592 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 BET1LQ9NYM9 111 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 EIF2B4Q9UI10 523 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 ZFP30Q9Y2G7 519 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 ZNF749O43361 778 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 BCL2L11O43521 198 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 TRAF3IP2O43734 574 aaPredicted RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 FAM86B2P0C5J1 330 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 STAG3L1P0CL83 205 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 G0S2P27469 103 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 CCR6P51684 374 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 PCBP1Q15365 356 aaKnown RBP eCLIP2.75□□□□□ -1.979e-6■■■■■ 29.7
CHD9-203ENST00000447540 ZNF528Q3MIS6 628 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 ADAM5Q6NVV9 412 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 PTGR2Q8N8N7 351 aaPredicted RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 TSTD1Q8NFU3 115 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 PSMG2Q969U7 264 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 NXPE3Q969Y0 559 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 F2RL3Q96RI0 385 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 ZNF382Q96SR6 550 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 NDC1Q9BTX1 674 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 GGACTQ9BVM4 153 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 SLC39A8Q9C0K1 460 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 PPP1R3EQ9H7J1 279 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 PTPRHQ9HD43 1115 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 TXNL4BQ9NX01 149 aaKnown RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 NUDT4Q9NZJ9 180 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 MYOTQ9UBF9 498 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 JAG2Q9Y219 1238 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 PDCD11Q14690 1871 aaKnown RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 WDR27A2RRH5 827 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 USP17L3A6NCW0 530 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 MARCH11A6NNE9 402 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 GAPDHSO14556 408 aaPredicted RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 FGF10O15520 208 aaPredicted RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 TRUB2O95900 331 aaKnown RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 CLEC3BP05452 202 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 RHOP08100 348 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 NDUFB7P17568 137 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 CDK2P24941 298 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 MGAT1P26572 445 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 RPP30P78346 268 aaKnown RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 HSF1Q00613 529 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 TSPAN31Q12999 210 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 HTR4Q13639 388 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 ELOA3BQ3SY89 546 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 FLYWCH1Q4VC44 716 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 TMEM201Q5SNT2 666 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 B3GNT8Q7Z7M8 397 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 ADGRA1Q86SQ6 560 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 RBM23Q86U06 439 aaKnown RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 C7orf61Q8IZ16 206 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 GALNT16Q8N428 558 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 TMEM145Q8NBT3 493 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 ELOA3Q8NG57 546 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 CD300LFQ8TDQ1 290 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 LINC00052Q96N35 136 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 NUDT9Q9BW91 350 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 ACTR3CQ9C0K3 210 aaPredicted RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 POMKQ9H5K3 350 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 TRPV4Q9HBA0 871 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 RPS10P5Q9NQ39 176 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 ROBO2Q9HCK4 1378 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 CLEC18AA5D8T8 446 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 SYNGR4O95473 234 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 YWHAQP27348 245 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 CDKN1BP46527 198 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 RPS10P46783 165 aaKnown RBP2.75□□□□□ -1.97
CHD9-203ENST00000447540 OR3A1P47881 315 aa2.75□□□□□ -1.97
CHD9-203ENST00000447540 XKP51811 444 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms