RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 USP9YO00507 2555 aaPredicted RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 NCKAP5O14513 1909 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 HECTD1Q9ULT8 2610 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 A0A087WZY1 265 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 TMEM247A6NEH6 219 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 GMFGO60234 142 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 NUDT14O95848 222 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 IL2RAP01589 272 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 PEPDP12955 493 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 CAPN3P20807 821 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 TCEA1P23193 301 aaKnown RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 PPIBP23284 216 aaKnown RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 HTR1EP28566 365 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 ATP12AP54707 1039 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 NUP107P57740 925 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 EEFSECP57772 596 aaKnown RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 ARHGAP11BQ3KRB8 267 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 GLYR1Q49A26 553 aaPredicted RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 NCCRP1Q6ZVX7 275 aaPredicted RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 RNF130Q86XS8 419 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 LACC1Q8IV20 430 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 GATSQ8NAP1 163 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 CHDHQ8NE62 594 aaPredicted RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 PHOSPHO1Q8TCT1 267 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 C1GALT1C1Q96EU7 318 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 TPT1P8Q9HAU6 139 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 POLE3Q9NRF9 147 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 THUMPD1Q9NXG2 353 aaKnown RBP14.86□□□□□ -0.03
SF3A1-204ENST00000447376 HRH3Q9Y5N1 445 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 CAPN7Q9Y6W3 813 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 COL12A1Q99715 3063 aa14.86□□□□□ -0.03
SF3A1-204ENST00000447376 SPTBN1Q01082 2364 aaKnown RBP14.85□□□□□ -0.03
SF3A1-204ENST00000447376 IGLV3-32A0A0A0MS00 114 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 HSPB2A8KAH6 182 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 HCRTR2O43614 444 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 SNX3O60493 162 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 EPPINO95925 133 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 OR12D1P0DN82 309 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 CPN1P15169 458 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 POU3F2P20265 443 aaPredicted RBP14.85□□□□□ -0.03
SF3A1-204ENST00000447376 GFRA1P56159 465 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 SRYQ05066 204 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 KLF10Q13118 480 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 GPR68Q15743 365 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 HSPB2Q16082 182 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 ACSF3Q4G176 576 aaPredicted RBP14.85□□□□□ -0.03
SF3A1-204ENST00000447376 GPAT3Q53EU6 434 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 RIPPLY2Q5TAB7 128 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 MEIOBQ8N635 442 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 TMCO5AQ8N6Q1 288 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 B4GALNT2Q8NHY0 566 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 ZFP90Q8TF47 636 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 LRRC46Q96FV0 321 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 WDYHV1Q96HA8 205 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 SH3YL1Q96HL8 342 aaPredicted RBP14.85□□□□□ -0.03
SF3A1-204ENST00000447376 TRIB1Q96RU8 372 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 SDF2Q99470 211 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 NMUR2Q9GZQ4 415 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 PAIP1Q9H074 479 aaKnown RBP14.85□□□□□ -0.03
SF3A1-204ENST00000447376 KCNJ16Q9NPI9 418 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 SLC52A3Q9NQ40 469 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 FBXO34Q9NWN3 711 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 CORO2BQ9UQ03 480 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 LIPT1Q9Y234 373 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 RNF6Q9Y252 685 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 DTNAQ9Y4J8 743 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 PCDHB14Q9Y5E9 798 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 FAM215AQ9Y5M1 114 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 KCNE3Q9Y6H6 103 aa14.85□□□□□ -0.03
SF3A1-204ENST00000447376 SPTAN1Q13813 2472 aaKnown RBP14.85□□□□□ -0.03
SF3A1-204ENST00000447376 CLIC1O00299 241 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 ZIC3O60481 467 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 GLI4P10075 376 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 ME2P23368 584 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 CASP9P55211 416 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 BCL2A1Q16548 175 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 MMEL1Q495T6 779 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 LRIF1Q5T3J3 769 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 APOOLQ6UXV4 268 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 ZAR1Q86SH2 424 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 RPRMLQ8N4K4 120 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 MARVELD2Q8N4S9 558 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 ZPLD1Q8TCW7 415 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 OIT3Q8WWZ8 545 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 ZBTB8AQ96BR9 441 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 CALHM2Q9HA72 323 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 CACYBPQ9HB71 228 aaKnown RBP14.84□□□□□ -0.03
SF3A1-204ENST00000447376 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.84□□□□□ -0.03
SF3A1-204ENST00000447376 VDAC3Q9Y277 283 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 WDR45Q9Y484 360 aa14.84□□□□□ -0.03
SF3A1-204ENST00000447376 BBIP1A8MTZ0 92 aa14.83□□□□□ -0.04
SF3A1-204ENST00000447376 EVPLLA8MZ36 301 aa14.83□□□□□ -0.04
SF3A1-204ENST00000447376 H3BML4 177 aa14.83□□□□□ -0.04
SF3A1-204ENST00000447376 DVL2O14641 736 aa14.83□□□□□ -0.04
SF3A1-204ENST00000447376 ZNF17P17021 662 aa14.83□□□□□ -0.04
SF3A1-204ENST00000447376 CRATP43155 626 aa14.83□□□□□ -0.04
SF3A1-204ENST00000447376 SUMO3P55854 103 aaPredicted RBP14.83□□□□□ -0.04
SF3A1-204ENST00000447376 RPS3AP61247 264 aaKnown RBP14.83□□□□□ -0.04
SF3A1-204ENST00000447376 FADDQ13158 208 aa14.83□□□□□ -0.04
SF3A1-204ENST00000447376 GNA13Q14344 377 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms