RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 RPS26P11Q5JNZ5 115 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 GPRIN1Q7Z2K8 1008 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 MRPL41Q8IXM3 137 aaKnown RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 INPP5EQ9NRR6 644 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 GPATCH2Q9NW75 528 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 PSORS1C1Q9UIG5 152 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF840PA6NDX5 716 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 RAB40ALP0C0E4 278 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ETV6P41212 452 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 TMEM35AQ53FP2 167 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF440Q8IYI8 595 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 RAB40AQ8WXH6 277 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 CNTNAP3Q9BZ76 1288 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 SAP130Q9H0E3 1048 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 RGPD1P0DJD0 1748 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 GABRPO00591 440 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 ACOT8O14734 319 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 HCRTR2O43614 444 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 MED6O75586 246 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 NDUFB2O95178 105 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 PPP1R3DO95685 299 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 EGFP01133 1207 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 ACP2P11117 423 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 PXT1Q8NFP0 134 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 RRNAD1Q96FB5 475 aaKnown RBP17.56■□□□□ 0.4
SHANK3-203ENST00000445220 TGM7Q96PF1 710 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 GPR62Q9BZJ7 368 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 SPHK2Q9NRA0 654 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 GJD2Q9UKL4 321 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF865P0CJ78 1059 aaPredicted RBP17.56■□□□□ 0.4
SHANK3-203ENST00000445220 HOXB2P14652 356 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 IFNGR1P15260 489 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 HMGCLP35914 325 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 DCST2Q5T1A1 773 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 TMEM163Q8TC26 289 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 SLC2A11Q9BYW1 496 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 SAGE1Q9NXZ1 904 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF175Q9Y473 711 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 SDC1P18827 310 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 GABRA5P31644 462 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 VEGFCP49767 419 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF136P52737 540 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 TAS2R19P59542 299 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 MANEALQ5VSG8 457 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 MLIPQ5VWP3 458 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 TP53INP2Q8IXH6 220 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 GPR150Q8NGU9 434 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 SCAMP4Q969E2 229 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 CENPOQ9BU64 300 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 DDX31Q9H8H2 851 aaKnown RBP17.56■□□□□ 0.4
SHANK3-203ENST00000445220 CLDND1Q9NY35 253 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 SHOXO15266 292 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 CXADRP78310 365 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 FLI1Q01543 452 aaPredicted RBP17.56■□□□□ 0.4
SHANK3-203ENST00000445220 LMAN2Q12907 356 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 GAREM2Q75VX8 874 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 ACOT11Q8WXI4 607 aaPredicted RBP17.56■□□□□ 0.4
SHANK3-203ENST00000445220 SLC25A18Q9H1K4 315 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 OSGIN1Q9UJX0 560 aa17.56■□□□□ 0.4
SHANK3-203ENST00000445220 COL16A1Q07092 1604 aaPredicted RBP17.56■□□□□ 0.4
SHANK3-203ENST00000445220 GKP32189 559 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 SERPINF1P36955 418 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 AKR1C2P52895 323 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 GATSQ8NAP1 163 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 TSPAN10Q9H1Z9 355 aaPredicted RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF442Q9H7R0 627 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ANKRD28O15084 1053 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 UGDHO60701 494 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 GATMP50440 423 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ERN2Q76MJ5 926 aaKnown RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF689Q96CS4 500 aaPredicted RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ZMYND19Q96E35 227 aaPredicted RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 SLC12A9Q9BXP2 914 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 DPH1Q9BZG8 443 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 DNTTIP1Q9H147 329 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 GALNT9Q9HCQ5 603 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 PPP4R1LQ9P1A2 415 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 LAMB4A4D0S4 1761 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 MYH6P13533 1939 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 RTCAO00442 366 aaKnown RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ADAM10O14672 748 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 FZD7O75084 574 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 SCG5P05408 212 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 MAGEB1P43366 347 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 SUOXP51687 545 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 MBTPS1Q14703 1052 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 ADPRMQ3LIE5 342 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 BEX5Q5H9J7 111 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 CATSPEREQ5SY80 951 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 SLC51BQ86UW2 128 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 SLC22A8Q8TCC7 542 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 PXYLP1Q8TE99 480 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 GSX2Q9BZM3 304 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 GOLGA4Q13439 2230 aaKnown RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 CASC3O15234 703 aaKnown RBP17.55■□□□□ 0.4
SHANK3-203ENST00000445220 PIP5K1CO60331 668 aa17.55■□□□□ 0.4
SHANK3-203ENST00000445220 C1QBP02746 253 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms