RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TP53BP1Q12888 1972 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P6-201ENST00000444896 ADAMTSL1Q8N6G6 1762 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 A0A1W2PQ72 361 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 TMEM89A2RUT3 159 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 MCF2LO15068 1137 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 ARPC1BO15143 372 aaKnown RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 CALUO43852 315 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 SYNGR4O95473 234 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 PNMA6AP0CW24 399 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 AHCYP23526 432 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 UCP1P25874 307 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 CASP9P55211 416 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 TCP10Q12799 353 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 ABRAXAS2Q15018 415 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZKSCAN8Q15776 578 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 ETFRF1Q6IPR1 90 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 APOBEC3HQ6NTF7 200 aaKnown RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 MOB2Q70IA6 237 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 YRDCQ86U90 279 aaKnown RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 GPBP1Q86WP2 473 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 CHCHD4Q8N4Q1 142 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 BEST4Q8NFU0 473 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 BIRC7Q96CA5 298 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 CCDC42Q96M95 316 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 DEFB118Q96PH6 123 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 GPR174Q9BXC1 333 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 NHEJ1Q9H9Q4 299 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 DBNDD1Q9H9R9 158 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 ELL3Q9HB65 397 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 HPS4Q9NQG7 708 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 STARD5Q9NSY2 213 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 ARMCX1Q9P291 453 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 LHX3Q9UBR4 397 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 SEC14L4Q9UDX3 406 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 EMCNQ9ULC0 261 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 GUCA1BQ9UMX6 200 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 SAR1BQ9Y6B6 198 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 SIPA1L1O43166 1804 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 MYH7BA7E2Y1 1941 aa3.46□□□□□ -1.86
HMGB3P6-201ENST00000444896 UBE4BO95155 1302 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 E9PAM4 449 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 CETN3O15182 167 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZBTB14O43829 449 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 SRPX2O60687 465 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 KBTBD11O94819 623 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 NDUFB10O96000 172 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 CXCL10P02778 98 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 PGK2P07205 417 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 GAP43P17677 238 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 ANXA13P27216 316 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 PTPN4P29074 926 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 HNRNPH3P31942 346 aaKnown RBP3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 MATKP42679 507 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 NPY2RP49146 381 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 PEX6Q13608 980 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 USH1GQ495M9 461 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 C14orf28Q4W4Y0 310 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZCWPW2Q504Y3 356 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 HSP90B2PQ58FF3 399 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 TAF3Q5VWG9 929 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 SEL1L3Q68CR1 1132 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 TATDN1Q6P1N9 297 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 WDR59Q6PJI9 974 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 ABRAXAS1Q6UWZ7 409 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 Q6ZR54 194 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 VPS36Q86VN1 386 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 LINC00612Q8N6U2 182 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 AGAP11Q8TF27 550 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 TMEM37Q8WXS4 190 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 TMEM45BQ96B21 275 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 DNAJC19Q96DA6 116 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 MBOAT7Q96N66 472 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 RANBP9Q96S59 729 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 CPXM1Q96SM3 734 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 CHP1Q99653 195 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 COQ7Q99807 217 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 CBWD1Q9BRT8 395 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 PARD6BQ9BYG5 372 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 NLNQ9BYT8 704 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 DDX47Q9H0S4 455 aaKnown RBP3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 SIRPDQ9H106 197 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZBP1Q9H171 429 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 ABCC13Q9NSE7 274 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 GPR83Q9NYM4 423 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 MIOXQ9UGB7 285 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 KCNN3Q9UGI6 736 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 RNF24Q9Y225 148 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF175Q9Y473 711 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 HYOU1Q9Y4L1 999 aa3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 KLF2Q9Y5W3 355 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P6-201ENST00000444896 PSME4Q14997 1843 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLX4Q8IY92 1834 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 KIF13BQ9NQT8 1826 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 LOXHD1Q8IVV2 1947 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF487B1APH4 448 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 E9PMD0 336 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 F5H6K3 240 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 PDXKO00764 312 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 CYB561D2O14569 222 aa3.44□□□□□ -1.86
HMGB3P6-201ENST00000444896 HSF2BPO75031 334 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms