RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-208	ENST00000444533	SERINC4	A6NH21	518 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	AQP7	O14520	342 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	ZNF264	O43296	627 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	GMFG	O60234	142 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	EIF4E2	O60573	245 aa	Known RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	SLC19A2	O60779	497 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	WISP1	O95388	367 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	IGHG3	P01860	377 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	HPN	P05981	417 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	TFPT	P0C1Z6	253 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	BMP2	P12643	396 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	UQCRB	P14927	111 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	HOXB9	P17482	250 aa	Predicted RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	GNLY	P22749	145 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	NUDT2	P50583	147 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	CCR4	P51679	360 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	MVD	P53602	400 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	GAS1	P54826	345 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	SUMO3	P55854	103 aa	Predicted RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	MTPN	P58546	118 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	MXRA7	P84157	204 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	CDK6	Q00534	326 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	CHRNE	Q04844	493 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	RBBP4	Q09028	425 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	1e-6	■■■■■ 27.3
SSBP3-208	ENST00000444533	LIN52	Q52LA3	116 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	INTS11	Q5TA45	600 aa	Known RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	FNDC7	Q5VTL7	733 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	RAET1L	Q5VY80	246 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	REEP3	Q6NUK4	255 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	ENPP6	Q6UWR7	440 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	FRRS1	Q6ZNA5	592 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	TRIL	Q7L0X0	811 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	SPPL2C	Q8IUH8	684 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	MSRB3	Q8IXL7	192 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	OR2M3	Q8NG83	312 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	NEIL3	Q8TAT5	605 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	WDR60	Q8WVS4	1066 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	TMEM19	Q96HH6	336 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	HOPX	Q9BPY8	73 aa	Predicted RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	TREX2	Q9BQ50	279 aa	Predicted RBP	12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	PIGQ	Q9BRB3	760 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	TMEM38A	Q9H6F2	299 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	NDE1	Q9NXR1	346 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	FBXL2	Q9UKC9	423 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	SLC13A4	Q9UKG4	626 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	OSGIN2	Q9Y236	505 aa		12.84	□□□□□ -0.35
SSBP3-208	ENST00000444533	IGLV3-32	A0A0A0MS00	114 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	TRGV8	A0A0C4DH27	118 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533		A0A1B0GUH1	482 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	AGAP5	A6NIR3	686 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	LINC01387	J3KSC0	135 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	SERPINB7	O75635	380 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	UGT2B17	O75795	530 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	ACTL6A	O96019	429 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	TPO	P07202	933 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	CHRM4	P08173	479 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	HK1	P19367	917 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	P2RX1	P51575	399 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	KCNJ10	P78508	379 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	KCNC4	Q03721	635 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	FUT5	Q11128	374 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	MRPL49	Q13405	166 aa	Known RBP	12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	CBFB	Q13951	182 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	SCARB2	Q14108	478 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	NANOGP8	Q6NSW7	305 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	APOOL	Q6UXV4	268 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	SERPINA11	Q86U17	422 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	YRDC	Q86U90	279 aa	Known RBP	12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	PM20D2	Q8IYS1	436 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	FADS6	Q8N9I5	356 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	HIPK4	Q8NE63	616 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	NFKBID	Q8NI38	313 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	SFXN2	Q96NB2	322 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	SLC38A1	Q9H2H9	487 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	UBQLN3	Q9H347	655 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	NANOG	Q9H9S0	305 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	TAGLN3	Q9UI15	199 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	CARD8	Q9Y2G2	431 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	BSN	Q9UPA5	3926 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	EML6	Q6ZMW3	1958 aa		12.83	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZNF462	Q96JM2	2506 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533		A0A1B0GVC2	190 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	PRORSD1P	A6NEY8	169 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	FIGNL2	A6NMB9	653 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	NPIPA2	E9PIF3	369 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	NPIPB9	F8W1W9	429 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	NPIPA3	F8WFD2	350 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	TNFRSF21	O75509	655 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	CELA3A	P09093	270 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	UBTFL6	P0CB48	400 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ARAF	P10398	606 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ESRRA	P11474	423 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ETS2	P15036	469 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	CD1E	P15812	388 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	PGC	P20142	388 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ME2	P23368	584 aa		12.82	□□□□□ -0.36

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