RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CEACAM20Q6UY09 585 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 DPPA4Q7L190 304 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 GLB1L2Q8IW92 636 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OR5W2Q8NH69 310 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FAM163AQ96GL9 167 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FCRL2Q96LA5 508 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SORCS2Q96PQ0 1159 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 GPER1Q99527 375 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 P2RX7Q99572 595 aaKnown RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ELL3Q9HB65 397 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 DKKL1Q9UK85 242 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FBXW11Q9UKB1 542 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 RIPK3Q9Y572 518 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 A0A0B4J2A0 478 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TMEM82A0PJX8 343 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TMEM218A2RU14 115 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF729A6NN14 1252 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SPATA31C2B4DYI2 1134 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 LOC730098B7Z3J9 87 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 BCL2L11O43521 198 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 CTSHP09668 335 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SLC2A1P11166 492 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PRF1P14222 555 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 AKR1C4P17516 323 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FDXRP22570 491 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PTTG1IPP53801 180 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 HENMT1Q5T8I9 393 aaKnown RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FKBP1CQ5VVH2 108 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FAM109BQ6ICB4 259 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 COX15Q7KZN9 410 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 REC114Q7Z4M0 266 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 KIAA0907Q7Z7F0 614 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ISCA2Q86U28 154 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PARGQ86W56 976 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 GPR135Q8IZ08 494 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 RGL4Q8IZJ4 473 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OR13C2Q8NGS9 318 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OR6K6Q8NGW6 343 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 GLYATL2Q8WU03 294 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SPRYD4Q8WW59 207 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 HAS2Q92819 552 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 C3orf30Q96M34 536 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 CMTM3Q96MX0 182 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TECTBQ96PL2 329 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 MTERF1Q99551 399 aaKnown RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 GABARAPL3Q9BY60 117 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 CIPCQ9C0C6 399 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 MS4A7Q9GZW8 240 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 LYRM2Q9NU23 88 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SHPKQ9UHJ6 478 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 C4AP0C0L4 1744 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 LTBP3Q9NS15 1303 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TRBV2A0A0J9YWF9 115 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 LNP1A1A4G5 178 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PAGE1O75459 146 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 LGI1O95970 557 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 VEGFBP49765 207 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 NHLH2Q02577 135 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 UGCGQ16739 394 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SOWAHCQ53LP3 525 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OR2T2Q6IF00 324 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SLC27A1Q6PCB7 646 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 UNQ6126/PRO20091Q6UXV3 157 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 P4HA3Q7Z4N8 544 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TMEM150AQ86TG1 271 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FUNDC1Q8IVP5 155 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 FBXO16Q8IX29 292 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 KDM8Q8N371 416 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 HORMAD2Q8N7B1 307 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 NLGN4YQ8NFZ3 816 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 CD99L2Q8TCZ2 262 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ARNTL2Q8WYA1 636 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF582Q96NG8 517 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ALG8Q9BVK2 526 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 MCOLN1Q9GZU1 580 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OR2AG1Q9H205 316 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TREM2Q9NZC2 230 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PCTPQ9UKL6 214 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PLEKHM1Q9Y4G2 1056 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TSPAN11A1L157 253 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 TMEM200CA6NKL6 621 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 I6L893 689 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ERAL1O75616 437 aaKnown RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 NCR1O76036 304 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 IGSF6O95976 241 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 HLA-AP01891 365 aaKnown RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 THP07101 528 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 RHOQP17081 205 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ZNF10P21506 573 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ABCD3P28288 659 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 PTGFRP43088 359 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 IL13RA1P78552 427 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OC90Q02509 493 aaPredicted RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 OLIG2Q13516 323 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 SF1Q15637 639 aaKnown RBP4.86□□□□□ -1.63
SCN11A-202ENST00000444237 LTB4RQ15722 352 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 VAMP3Q15836 100 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 UPP1Q16831 310 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 C9orf64Q5T6V5 341 aa4.86□□□□□ -1.63
SCN11A-202ENST00000444237 ZC3H14Q6PJT7 736 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms