RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 SULF2Q8IWU5 870 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 ULK2Q8IYT8 1036 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 GATSQ8NAP1 163 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 FAM98AQ8NCA5 519 aaKnown RBP14.43□□□□□ -0.1
USP40-206ENST00000443711 OR2M7Q8NG81 312 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 PHOSPHO1Q8TCT1 267 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 RASSF5Q8WWW0 418 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 FAM162AQ96A26 154 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 TMEM41AQ96HV5 264 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 FRMD6Q96NE9 622 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 PCDHAC1Q9H158 963 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 SLC25A18Q9H1K4 315 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 GORASP2Q9H8Y8 452 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 GALNT9Q9HCQ5 603 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 DEPPQ9NTK1 212 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 PPP4R1LQ9P1A2 415 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 ZNF443Q9Y2A4 671 aaPredicted RBP14.43□□□□□ -0.1
USP40-206ENST00000443711 SLC35A3Q9Y2D2 325 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 WIF1Q9Y5W5 379 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 C2orf72A6NCS6 295 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 ARPC2O15144 300 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 EIF4E2O60573 245 aaKnown RBP14.42□□□□□ -0.1
USP40-206ENST00000443711 SORBS2O94875 1100 aaKnown RBP14.42□□□□□ -0.1
USP40-206ENST00000443711 STAMBPO95630 424 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 CSTAP01040 98 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 PRKAR1BP31321 381 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 MASP1P48740 699 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 GPR85P60893 370 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 TRAP1Q12931 704 aaKnown RBP14.42□□□□□ -0.1
USP40-206ENST00000443711 ELOAQ14241 798 aaKnown RBP14.42□□□□□ -0.1
USP40-206ENST00000443711 PLEKHN1Q494U1 663 aaPredicted RBP14.42□□□□□ -0.1
USP40-206ENST00000443711 LRRC23Q53EV4 343 aaPredicted RBP14.42□□□□□ -0.1
USP40-206ENST00000443711 EIPR1Q53HC9 387 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 RNF220Q5VTB9 566 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 FNDC7Q5VTL7 733 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 DHRS4L2Q6PKH6 230 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 DUSP19Q8WTR2 217 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 TAMM41Q96BW9 452 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 ASB9Q96DX5 294 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 ZNF597Q96LX8 424 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 PINK1Q9BXM7 581 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 RTN4RQ9BZR6 473 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 ADPRHL2Q9NX46 363 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 ACTR3BQ9P1U1 418 aa14.42□□□□□ -0.1
USP40-206ENST00000443711 BOKQ9UMX3 212 aaPredicted RBP14.42□□□□□ -0.1
USP40-206ENST00000443711 LOC400499M0QZD8 3231 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 A0A0G2JMM0 328 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 A0A1W2PPB8 328 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 A0A1W2PRS3 328 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 KIR3DP1A8MWS1 328 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 ADAM10O14672 748 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 SNPHO15079 494 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 ZNF264O43296 627 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 TRIM3O75382 744 aaPredicted RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 OPN1SWP03999 348 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 UBL4AP11441 157 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 MSX1P28360 303 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 KCNJ5P48544 419 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 MEOX1P50221 254 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 RNF144AP50876 292 aaPredicted RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 EEF1A1P68104 462 aaKnown RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 DMTNQ08495 405 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 CD226Q15762 336 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 CYBRD1Q53TN4 286 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 MRPL2Q5T653 305 aaKnown RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 SLC6A19Q695T7 634 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 RPUSD3Q6P087 351 aaKnown RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 ZNF836Q6ZNA1 936 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 DHFR2Q86XF0 187 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 PLCZ1Q86YW0 608 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 EID3Q8N140 333 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 TEX19Q8NA77 164 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 OR1J4Q8NGS1 313 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 PNPLA2Q96AD5 504 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 CCDC124Q96CT7 223 aaKnown RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 NSMCE2Q96MF7 247 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 JSRP1Q96MG2 331 aaPredicted RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 RNF145Q96MT1 663 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 LAT2Q9GZY6 243 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 EVA1AQ9H8M9 152 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 KLHL28Q9NXS3 571 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 TUBA8Q9NY65 449 aaPredicted RBP14.41□□□□□ -0.1
USP40-206ENST00000443711 RPS6KA6Q9UK32 745 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 SLC13A4Q9UKG4 626 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 BAG5Q9UL15 447 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 LHX6Q9UPM6 363 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 PCNX3Q9H6A9 2034 aa14.41□□□□□ -0.1
USP40-206ENST00000443711 ITPR1Q14643 2758 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 EPG5Q9HCE0 2579 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 IGLV3-32A0A0A0MS00 114 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 CDHR4A6H8M9 788 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 CLDN24A6NM45 220 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 GNB5O14775 395 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 SUV39H1O43463 412 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 HCRTR2O43614 444 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 TPST1O60507 370 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 SERPINA1P01009 418 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 C8BP07358 591 aa14.4□□□□□ -0.1
USP40-206ENST00000443711 ELAVL4P26378 380 aaKnown RBP14.4□□□□□ -0.1
USP40-206ENST00000443711 CRYBA2P53672 197 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms