RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 H0YIG0 161 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 GTPBP1O00178 669 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 TAF4O00268 1085 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 FABP3P05413 133 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 PRPS1L1P21108 318 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 CBLP22681 906 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ANXA11P50995 505 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ALDH6A1Q02252 535 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 PRKCDQ05655 676 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SQSTM1Q13501 440 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 COX20Q5RI15 118 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 KHDRBS2Q5VWX1 349 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 STEAP3Q658P3 488 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR4C11Q6IEV9 310 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 NDUFAF7Q7L592 441 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 P4HA3Q7Z4N8 544 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 PAQR7Q86WK9 346 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 GALNT12Q8IXK2 581 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ACOT4Q8N9L9 421 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 RIT1Q92963 219 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 CDCA4Q9BXL8 241 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF717Q9BY31 904 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 HMG20AQ9NP66 347 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SACM1LQ9NTJ5 587 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 REV1Q9UBZ9 1251 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 CCDC88CQ9P219 2028 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 PTGES3LE9PB15 166 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 KPNA4O00629 521 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 PRRG2O14669 202 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 CRYABP02511 175 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 MAOAP21397 527 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 KCNJ5P48544 419 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZIC1Q15915 447 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SSX1Q16384 188 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SGCBQ16585 318 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 GRHL2Q6ISB3 625 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR4K17Q8NGC6 315 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 PSMA8Q8TAA3 256 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 CPT1CQ8TCG5 803 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAM120BQ96EK7 910 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 NIPSNAP1Q9BPW8 284 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 HOXD1Q9GZZ0 328 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMEM38AQ9H6F2 299 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 RNF167Q9H6Y7 350 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRIOO75962 3097 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SDK2Q58EX2 2172 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC35F4A4IF30 521 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 KLRC4-KLRK1H3BQV0 150 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 hCG_2039718K7EN88 272 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ADORA3P0DMS8 318 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 EEF1B2P24534 225 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 S100A3P33764 101 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SELENOWP63302 87 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 INAQ16352 499 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 CRB2Q5IJ48 1285 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 DEPDC1Q5TB30 811 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 RNLSQ5VYX0 342 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ERICH5Q6P6B1 374 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 C16orf87Q6PH81 154 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 OPN5Q6U736 354 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 SETD9Q8NE22 299 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAM83FQ8NEG4 500 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 BRIX1Q8TDN6 353 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 TSLPQ969D9 159 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 DOHHQ9BU89 302 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ACER3Q9NUN7 267 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 TSC22D4Q9Y3Q8 395 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 ISPDA4D126 451 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLCA1A8K7I4 914 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 G3V3Y1 287 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 RGS10O43665 173 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 LCMT2O60294 686 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 SNX4O95219 450 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 CYP4B1P13584 511 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF24P17028 368 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 SSR4P51571 173 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 NR0B1P51843 470 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 PSMD4P55036 377 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 GPR85P60893 370 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 IL1RL1Q01638 556 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 HSPB3Q12988 150 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 SOWAHCQ53LP3 525 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 IL17RDQ8NFM7 739 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 RELTQ969Z4 430 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 EFHD2Q96C19 240 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 ITPAQ9BY32 194 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 BARHL1Q9BZE3 327 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 TBL1XR1Q9BZK7 514 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 PDP1Q9P0J1 537 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 TBC1D24Q9ULP9 559 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRAPPC4Q9Y296 219 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 A0A087WV48 116 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZAR1LA6NP61 321 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 CDRT15L2A8MXV6 281 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 RFXANKO14593 260 aa6.84□□□□□ -1.31
CDC42BPA-208ENST00000442054 RGS13O14921 159 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms