RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 C1QCP02747 245 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 IL6P05231 212 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 MSX1P28360 303 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 CHI3L1P36222 383 aaPredicted RBP21.38■■□□□ 1.01
VARS-217ENST00000440048 CDKN2CP42773 168 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 ATP12AP54707 1039 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 TFF3Q07654 80 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 LRRC74AQ0VAA2 488 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 HSPB2Q16082 182 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 BCL2A1Q16548 175 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 KLHL26Q53HC5 615 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.38■■□□□ 1.01
VARS-217ENST00000440048 TNFAIP8L2Q6P589 184 aaPredicted RBP21.38■■□□□ 1.01
VARS-217ENST00000440048 ZNF527Q8NB42 609 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 NAXEQ8NCW5 288 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 SH3YL1Q96HL8 342 aaPredicted RBP21.38■■□□□ 1.01
VARS-217ENST00000440048 MAGEB18Q96M61 343 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 EBF4Q9BQW3 602 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 TCF7L2Q9NQB0 619 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 ZNF337Q9Y3M9 751 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 POLR3GO15318 223 aaPredicted RBP21.37■■□□□ 1.01
VARS-217ENST00000440048 SNRPB2P08579 225 aaKnown RBP21.37■■□□□ 1.01
VARS-217ENST00000440048 OR12D1P0DN82 309 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 PEPDP12955 493 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 COX6B1P14854 86 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 POU3F2P20265 443 aaPredicted RBP21.37■■□□□ 1.01
VARS-217ENST00000440048 RNF144AP50876 292 aaPredicted RBP21.37■■□□□ 1.01
VARS-217ENST00000440048 TMEM44Q2T9K0 475 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 ARHGAP11BQ3KRB8 267 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 HEPHL1Q6MZM0 1159 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 ZNF621Q6ZSS3 439 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 MIER2Q8N344 545 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 TRIML2Q8N7C3 387 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 OR9I1Q8NGQ6 314 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 PHOSPHO1Q8TCT1 267 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 XAGE5Q8WWM1 108 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 RAB8BQ92930 207 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 KLHDC3Q9BQ90 382 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 PIGQQ9BRB3 760 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 ACBD3Q9H3P7 528 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 EXD2Q9NVH0 621 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 VDAC3Q9Y277 283 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 TACC2O95359 2948 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 MED12LQ86YW9 2145 aa21.37■■□□□ 1.01
VARS-217ENST00000440048 A0A087WZY1 265 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 MBD3L4A6NDZ8 208 aaPredicted RBP21.36■■□□□ 1.01
VARS-217ENST00000440048 MBD3L3A6NE82 208 aaPredicted RBP21.36■■□□□ 1.01
VARS-217ENST00000440048 MBD3L5A6NJ08 208 aaPredicted RBP21.36■■□□□ 1.01
VARS-217ENST00000440048 CLCA1A8K7I4 914 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 SHISA8B8ZZ34 492 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 LINC01387J3KSC0 135 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 STX11O75558 287 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 AGR2O95994 175 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 IL2RAP01589 272 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 GSNP06396 782 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 KHKP50053 298 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 POLR2JP52435 117 aaKnown RBP21.36■■□□□ 1.01
VARS-217ENST00000440048 AQP5P55064 265 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 OLIG3Q7RTU3 272 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 C16orf62Q7Z3J2 963 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 MTERF4Q7Z6M4 381 aaKnown RBP21.36■■□□□ 1.01
VARS-217ENST00000440048 ADGRE4PQ86SQ3 457 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 C9orf106Q8NAJ2 232 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 B4GALNT2Q8NHY0 566 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 MBD3L2Q8NHZ7 208 aaPredicted RBP21.36■■□□□ 1.01
VARS-217ENST00000440048 CCDC28BQ9BUN5 200 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 NPDC1Q9NQX5 325 aaPredicted RBP21.36■■□□□ 1.01
VARS-217ENST00000440048 DTNAQ9Y4J8 743 aa21.36■■□□□ 1.01
VARS-217ENST00000440048 OIP5O43482 229 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 HCRTR2O43614 444 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 FCMRO60667 390 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 ZNF117Q03924 483 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 GPR68Q15743 365 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 SLC25A35Q3KQZ1 300 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 ATAD3BQ5T9A4 648 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 PLXDC2Q6UX71 529 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 RNF130Q86XS8 419 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 UBQLNLQ8IYU4 475 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 ZNF614Q8N883 585 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 ACBD4Q8NC06 268 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 UCN2Q96RP3 112 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 NMUR2Q9GZQ4 415 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 ZNF350Q9GZX5 532 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 ENKD1Q9H0I2 346 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 MED17Q9NVC6 651 aa21.35■■□□□ 1.01
VARS-217ENST00000440048 HEATR5AQ86XA9 2040 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 FAM234BA2RU67 622 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 H3BML4 177 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 H3BNH8 94 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 RFXANKO14593 260 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 MRPL19P49406 292 aaKnown RBP21.34■■□□□ 1.01
VARS-217ENST00000440048 ZNF136P52737 540 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 CLDN15P56746 228 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 FUT5Q11128 374 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 PLPPR5Q32ZL2 321 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 PDZK1Q5T2W1 519 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 POMZP3Q6PJE2 187 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 MSANTD1Q6ZTZ1 278 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 NPAS1Q99742 590 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 SPOCK3Q9BQ16 436 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms