RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 STARP49675 285 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TAS2R38P59533 333 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 CDK5Q00535 292 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TMEM44Q2T9K0 475 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 FNDC3BQ53EP0 1204 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 CCNJQ5T5M9 372 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 C1orf94Q6P1W5 598 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 FRRS1Q6ZNA5 592 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TMEM91Q6ZNR0 172 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 C17orf107Q6ZR85 190 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 AMZ2Q86W34 360 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 NUP43Q8NFH3 380 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 OR8K3Q8NH51 312 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ABHD4Q8TB40 342 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ASB12Q8WXK4 309 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 GHSRQ92847 366 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 RELTQ969Z4 430 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SGTBQ96EQ0 304 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ZC3HAV1LQ96H79 300 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 LYSMD1Q96S90 227 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ZNF436Q9C0F3 470 aaPredicted RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 MCOLN1Q9GZU1 580 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 WDR26Q9H7D7 661 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 CYSLTR2Q9NS75 346 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TAS2R10Q9NYW0 307 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 IL36AQ9UHA7 158 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 A0A1B0GVT2 93 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 OR6C74A6NCV1 312 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 MANSC4A6NHS7 340 aaPredicted RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 AGAP14A8MT82 685 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 E9PI62 339 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 HPXP02790 462 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 UCHL1P09936 223 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 ACSM4P0C7M7 580 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 TIMP2P16035 220 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 CSNK2A2P19784 350 aaPredicted RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 MMP12P39900 470 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 SELENOPP49908 381 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 UBE2MP61081 183 aaKnown RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 PDE7AQ13946 482 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 ATXN7L3Q14CW9 347 aaPredicted RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 STK11Q15831 433 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 AKIRIN2Q53H80 203 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 ARHGAP15Q53QZ3 475 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 PRSS42Q7Z5A4 293 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 OAFQ86UD1 273 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 ZNF687Q8N1G0 1237 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 OR9A2Q8NGT5 310 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 ADAMTS14Q8WXS8 1223 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 NUS1Q96E22 293 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 ZMYND19Q96E35 227 aaPredicted RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 LINC00052Q96N35 136 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 OR52D1Q9H346 318 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 GPN1Q9HCN4 374 aaPredicted RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 ZFP64Q9NPA5 681 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 PRDM9Q9NQV7 894 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 USP36Q9P275 1121 aaKnown RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 RPS6KB2Q9UBS0 482 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 CCL26Q9Y258 94 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 GPR55Q9Y2T6 319 aaPredicted RBP8.46□□□□□ -1.05
COPB1-202ENST00000439561 WDR45Q9Y484 360 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 SPTBP11277 2137 aa8.46□□□□□ -1.05
COPB1-202ENST00000439561 ABHD14A-ACY1A0A1B0GW23 586 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 NPIPB8E9PQR5 432 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 RP2O75695 350 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 CLUP10909 449 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 MTNR1BP49286 362 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 LRRC37A5PQ49AS3 106 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 C6orf132Q5T0Z8 1188 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 C18orf63Q68DL7 685 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 ELP2Q6IA86 826 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 APOOLQ6UXV4 268 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 LIPIQ6XZB0 460 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 GET4Q7L5D6 327 aaPredicted RBP8.46□□□□□ -1.06
COPB1-202ENST00000439561 KCTD20Q7Z5Y7 419 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 GPALPP1Q8IXQ4 340 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 OR4D9Q8NGE8 314 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 ZCCHC10Q8TBK6 192 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 IGSF21Q96ID5 467 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 C20orf85Q9H1P6 137 aa8.46□□□□□ -1.06
COPB1-202ENST00000439561 TRBV23OR9-2A0A075B6M9 112 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 TRAV27A0A087WT01 109 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 TRBV2A0A0J9YWF9 115 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 hCG_1807616A0A1W2PRN6 198 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 LINC00862A6NCI5 91 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ZNF593O00488 134 aaPredicted RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 SIGLEC5O15389 551 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 PEX14O75381 377 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 SOX30O94993 753 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 WNT1P04628 370 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 ANXA7P20073 488 aaKnown RBP8.45□□□□□ -1.06
COPB1-202ENST00000439561 HTR1FP30939 366 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 CENPAP49450 140 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 C21orf58P58505 322 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 PUDPQ08623 228 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 SIGLEC14Q08ET2 396 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 DUSP6Q16828 381 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 RNF44Q7L0R7 432 aa8.45□□□□□ -1.06
COPB1-202ENST00000439561 GID4Q8IVV7 300 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms