RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TMEM44Q2T9K0 475 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 LSM12Q3MHD2 195 aaKnown RBP16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 XKR7Q5GH72 579 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 PDSS1Q5T2R2 415 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 CCNJQ5T5M9 372 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 ZNF474Q6S9Z5 364 aaPredicted RBP16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 FAM214BQ7L5A3 538 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 ZAR1Q86SH2 424 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 GGNQ86UU5 652 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 GTPBP8Q8N3Z3 284 aaPredicted RBP16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 NATD1Q8N6N6 113 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 OR56A1Q8NGH5 318 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 B4GALNT2Q8NHY0 566 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 ACTRT2Q8TDY3 377 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 OR5P2Q8WZ92 322 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 CDS1Q92903 461 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 TUBGCP3Q96CW5 907 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 WFIKKN1Q96NZ8 548 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 STACQ99469 402 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 DUSP22Q9NRW4 184 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 SIRT3Q9NTG7 399 aaPredicted RBP16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 MED17Q9NVC6 651 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 C6orf203Q9P0P8 240 aaPredicted RBP16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 CFLARO15519 480 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 CTIFO43310 598 aaKnown RBP16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 AQP8O94778 261 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 NUDT14O95848 222 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 LAMP1P11279 417 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 CCT3P49368 545 aaKnown RBP16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 ADAM8P78325 824 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 EXOC3L2Q2M3D2 409 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 PLPPR5Q32ZL2 321 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 C6orf136Q5SQH8 315 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 IL23RQ5VWK5 629 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 EMBQ6PCB8 327 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 ZNF610Q8N9Z0 462 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 OR10D3Q8NH80 312 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 ADAMTS15Q8TE58 950 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 GMPPAQ96IJ6 420 aaPredicted RBP16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 RNF145Q96MT1 663 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 ACTRT3Q9BYD9 372 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 KLHL4Q9C0H6 718 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 PIGUQ9H490 435 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 FANCFQ9NPI8 374 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 FBXO34Q9NWN3 711 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 GIN1Q9NXP7 522 aa16.57■□□□□ 0.24
AC004540.1-201ENST00000439120 A0A1W2PQD3 144 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 C7orf72A4D263 438 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 H3BNH8 94 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 SOX30O94993 753 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 CGAP01215 116 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 OPN1LWP04000 364 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 BPGMP07738 259 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 PRPS1L1P21108 318 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 SOAT1P35610 550 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 RAC1P63000 192 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 MAD2L1Q13257 205 aaPredicted RBP16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 CDC73Q6P1J9 531 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 ESPNLQ6ZVH7 1005 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 OR6K3Q8NGY3 331 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 PHOSPHO1Q8TCT1 267 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 PIK3IP1Q96FE7 263 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 C3orf30Q96M34 536 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 HOXD1Q9GZZ0 328 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 TMEM185BQ9H7F4 350 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 BEX4Q9NWD9 120 aaPredicted RBP16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 ZDHHC2Q9UIJ5 367 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 CLEC4AQ9UMR7 237 aa16.56■□□□□ 0.24
AC004540.1-201ENST00000439120 TNFSF11O14788 317 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 CXCL13O43927 109 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 C6orf47O95873 294 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 CD53P19397 219 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 EIF1P41567 113 aaKnown RBP16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 SLC6A8P48029 635 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 CD226Q15762 336 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 DCST2Q5T1A1 773 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 HBMQ6B0K9 141 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 BHLHB9Q6PI77 547 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 ZNF550Q7Z398 422 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 NUDCD3Q8IVD9 361 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 KRTCAP2Q8N6L1 136 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 ZNF614Q8N883 585 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 OR2V1Q8NHB1 315 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 SFXN5Q8TD22 340 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 AENQ8WTP8 325 aaKnown RBP16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 MOAP1Q96BY2 351 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 REXO5Q96IC2 774 aaKnown RBP16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 BHLHE41Q9C0J9 482 aaPredicted RBP16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 CXorf36Q9H7Y0 433 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 ABCA4P78363 2273 aa16.55■□□□□ 0.24
AC004540.1-201ENST00000439120 A0A1W2PPR1 153 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 GTPBP1O00178 669 aaKnown RBP16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 CRYGSP22914 178 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 CCKARP32238 428 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 GUSBP1Q15486 140 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 PGS1Q32NB8 556 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 EXOSC6Q5RKV6 272 aaKnown RBP16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 GTF2IRD2BQ6EKJ0 949 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms