RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CD302Q8IX05 232 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 LINC00612Q8N6U2 182 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 FADS6Q8N9I5 356 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 OR52B4Q8NGK2 314 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 OR52J3Q8NH60 311 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 GIPC3Q8TF64 312 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 CRYGNQ8WXF5 182 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 DLX4Q92988 240 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ATP6V1G3Q96LB4 118 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PSKH2Q96QS6 385 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 MCCC1Q96RQ3 725 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 SH3GL3Q99963 347 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 SIKE1Q9BRV8 207 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 TBC1D10AQ9BXI6 508 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 NLNQ9BYT8 704 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 TSGA10Q9BZW7 698 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 XKR8Q9H6D3 395 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ALG9Q9H6U8 611 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 WDR76Q9H967 626 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 SMPD3Q9NY59 655 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 CNOT2Q9NZN8 540 aaKnown RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 DHRS4-AS1Q9P1J3 65 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 RCOR3Q9P2K3 495 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ATXN10Q9UBB4 475 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF107Q9UII5 783 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PURGQ9UJV8 347 aaKnown RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF490Q9ULM2 529 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 NAALAD2Q9Y3Q0 740 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 FKBP7Q9Y680 259 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 GMEB1Q9Y692 573 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 GRIN2DO15399 1336 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PRDM2Q13029 1718 aa2.9□□□□□ -1.94
LSM1P1-201ENST00000438629 A0A0U1RRA0 63 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 MFSD2BA6NFX1 497 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 OR6C65A6NJZ3 312 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ANKRD30BLA7E2S9 258 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 C11orf98E9PRG8 122 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 CASC3O15234 703 aaKnown RBP2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 YKT6O15498 198 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ZW10O43264 779 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 TOM1L1O75674 476 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SURF6O75683 361 aaKnown RBP2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 STK17BO94768 372 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 VENTXO95231 258 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 AGTP01019 485 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ASNSP08243 561 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC35G4P0C7Q5 338 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 PVRP15151 417 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 RPA2P15927 270 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 FUT1P19526 365 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 CHI3L1P36222 383 aaPredicted RBP2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 TRIM23P36406 574 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 CCT6AP40227 531 aaKnown RBP2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 CSRP3P50461 194 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 B2MP61769 119 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 DR1Q01658 176 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 NCBP1Q09161 790 aaKnown RBP2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 PLD1Q13393 1074 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 GNA13Q14344 377 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 TIMM50Q3ZCQ8 353 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 AGKQ53H12 422 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 LDLRAP1Q5SW96 308 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 C1orf185Q5T7R7 199 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 MARC1Q5VT66 337 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 RSBN1Q5VWQ0 802 aaPredicted RBP2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SULT1C3Q6IMI6 304 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 C8orf74Q6P047 294 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 NKAIN4Q8IVV8 208 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SPAG16Q8N0X2 631 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 TTC5Q8N0Z6 440 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 CENPSQ8N2Z9 138 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SPEM1Q8N4L4 309 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 CERS5Q8N5B7 392 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 BCORP1Q8N888 145 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 BHLHE23Q8NDY6 225 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 STKLD1Q8NE28 680 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 OR2T34Q8NGX1 318 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 TYMSOSQ8TAI1 123 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ZPLD1Q8TCW7 415 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 VN1R17PQ8TDU5 208 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 LHX4Q969G2 390 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 FBXO32Q969P5 355 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SGK3Q96BR1 496 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 APOOQ9BUR5 198 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SIRPDQ9H106 197 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 PSTPIP2Q9H939 334 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ROPN1Q9HAT0 212 aaPredicted RBP2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ESM1Q9NQ30 184 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 TIGARQ9NQ88 270 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 STARD5Q9NSY2 213 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF446Q9NWS9 450 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 GDAP2Q9NXN4 497 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ARMCX1Q9P291 453 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 ATPIF1Q9UII2 106 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 KLHDC2Q9Y2U9 406 aa2.9□□□□□ -1.95
LSM1P1-201ENST00000438629 SBNO1A3KN83 1393 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 IGLV3-10A0A075B6K4 115 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 TRBV7-9A0A0J9YWB2 115 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 A0A0U1RQS6 177 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms