RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ZG16BQ96DA0 208 aa14.69□□□□□ -0.06
SNRPB-202ENST00000438552 THUMPD3Q9BV44 507 aaKnown RBP14.69□□□□□ -0.06
SNRPB-202ENST00000438552 OR2B2Q9GZK3 357 aa14.69□□□□□ -0.06
SNRPB-202ENST00000438552 THUMPD1Q9NXG2 353 aaKnown RBP14.69□□□□□ -0.06
SNRPB-202ENST00000438552 SPRR3Q9UBC9 169 aa14.69□□□□□ -0.06
SNRPB-202ENST00000438552 OSGIN2Q9Y236 505 aa14.69□□□□□ -0.06
SNRPB-202ENST00000438552 GCN1Q92616 2671 aaKnown RBP14.69□□□□□ -0.06
SNRPB-202ENST00000438552 DSPPQ9NZW4 1301 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 GTF3C1Q12789 2109 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 ESPL1Q14674 2120 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 RP1L1Q8IWN7 2480 aaPredicted RBP14.68□□□□□ -0.06
SNRPB-202ENST00000438552 TMEM247A6NEH6 219 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 SERINC4A6NH21 518 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 H3BNH8 94 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 AIM2O14862 343 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 HCRTR2O43614 444 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 UBL4AP11441 157 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 ABOP16442 354 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 RPS4Y1P22090 263 aaKnown RBP14.68□□□□□ -0.06
SNRPB-202ENST00000438552 DPP4P27487 766 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 SRD5A2P31213 254 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 RBPJQ06330 500 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 CYP51A1Q16850 503 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 EIF2S3LQ2VIR3 472 aaKnown RBP14.68□□□□□ -0.06
SNRPB-202ENST00000438552 NANOGP8Q6NSW7 305 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 ARHGAP11AQ6P4F7 1023 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 MISPQ8IVT2 679 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 TMCO5AQ8N6Q1 288 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 ANKS4BQ8N8V4 417 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 CCDC197Q8NCU1 140 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 NEIL3Q8TAT5 605 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 PRR7Q8TB68 274 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 ARSGQ96EG1 525 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 LRRC37BQ96QE4 947 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 TREX2Q9BQ50 279 aaPredicted RBP14.68□□□□□ -0.06
SNRPB-202ENST00000438552 NANOGQ9H9S0 305 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 ACKR4Q9NPB9 350 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 GID8Q9NWU2 228 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 TAS2R10Q9NYW0 307 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 CALML5Q9NZT1 146 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 SH3BGRL2Q9UJC5 107 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 CARD8Q9Y2G2 431 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 SLC6A5Q9Y345 797 aa14.68□□□□□ -0.06
SNRPB-202ENST00000438552 MED12Q93074 2177 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 MYO18BQ8IUG5 2567 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 HEATR5AQ86XA9 2040 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 A0A1B0GVC2 190 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 AGAP5A6NIR3 686 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 CLDN24A6NM45 220 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 AQP7O14520 342 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 SUSD5O60279 629 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 HCN1O60741 890 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 SLC19A2O60779 497 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 BCAS1O75363 584 aaPredicted RBP14.67□□□□□ -0.06
SNRPB-202ENST00000438552 WISP1O95388 367 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 PTGS2P35354 604 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 NUDT2P50583 147 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 DSCR4P56555 118 aaPredicted RBP14.67□□□□□ -0.06
SNRPB-202ENST00000438552 PLAURQ03405 335 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 FGFBP1Q14512 234 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 ADRM1Q16186 407 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 ZNF630Q2M218 657 aaPredicted RBP14.67□□□□□ -0.06
SNRPB-202ENST00000438552 AP1ARQ63HQ0 302 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 CBLN3Q6UW01 205 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 ARSKQ6UWY0 536 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 PTOV1Q86YD1 416 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 B4GALNT2Q8NHY0 566 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 CMTM5Q96DZ9 223 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 C1GALT1C1Q96EU7 318 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 KAT8Q9H7Z6 458 aaKnown RBP14.67□□□□□ -0.06
SNRPB-202ENST00000438552 PTGES2Q9H7Z7 377 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 VDAC3Q9Y277 283 aa14.67□□□□□ -0.06
SNRPB-202ENST00000438552 RPH3AQ9Y2J0 694 aaPredicted RBP14.67□□□□□ -0.06
SNRPB-202ENST00000438552 C15orf38-AP3S2A0A0A6YYH1 394 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 SHISA8B8ZZ34 492 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 C5orf58C9J3I9 102 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 NPIPA2E9PIF3 369 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 NPIPA3F8WFD2 350 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 GTPBP1O00178 669 aaKnown RBP14.66□□□□□ -0.06
SNRPB-202ENST00000438552 NDUFAB1O14561 156 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 CYP7B1O75881 506 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 CSTAP01040 98 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 NPPAP01160 153 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 TPOP07202 933 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 UBTFL6P0CB48 400 aaPredicted RBP14.66□□□□□ -0.06
SNRPB-202ENST00000438552 HK1P19367 917 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 PRDX6P30041 224 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 CPA2P48052 419 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 CCR4P51679 360 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 CBX1P83916 185 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 CDK6Q00534 326 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 SKP2Q13309 424 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 SCARB2Q14108 478 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 GNA13Q14344 377 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 GANABQ14697 944 aaKnown RBP14.66□□□□□ -0.06
SNRPB-202ENST00000438552 DCST1Q5T197 706 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 C1QL3Q5VWW1 255 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 CD163Q86VB7 1156 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 IFNEQ86WN2 208 aa14.66□□□□□ -0.06
SNRPB-202ENST00000438552 VRK2Q86Y07 508 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms