RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SNTA1Q13424 505 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 NNATQ16517 81 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 HBMQ6B0K9 141 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ACSM5Q6NUN0 579 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 FIGLAQ6QHK4 219 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 LRRN1Q6UXK5 716 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 CAMKMTQ7Z624 323 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ZER1Q7Z7L7 766 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 PRSS58Q8IYP2 241 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF619Q8N2I2 560 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 JAGN1Q8N5M9 183 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 METTL21AQ8WXB1 218 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RELTQ969Z4 430 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ARRDC3Q96B67 414 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 WDR92Q96MX6 357 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 G6PC3Q9BUM1 346 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SGPP1Q9BX95 441 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ALOXE3Q9BYJ1 711 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SRA1Q9HD15 236 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 USP36Q9P275 1121 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 PCDH10Q9P2E7 1040 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RBBP6Q7Z6E9 1792 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 IGLV3-16A0A075B6K0 115 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 A8MUA0 341 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GPR89AB7ZAQ6 455 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 WASH3PC4AMC7 463 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 RNF13O43567 381 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 LDOC1O95751 146 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 CD160O95971 181 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 TNFP01375 233 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 INHBBP09529 407 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GPR89BP0CG08 455 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF888P0CJ79 500 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SPNP16150 400 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 TYRP1P17643 537 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ATP5A1P25705 553 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GDI2P50395 445 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ART1P52961 327 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SHC2P98077 582 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 DEFA5Q01523 94 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 PDE7AQ13946 482 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ITPRIPL2Q3MIP1 535 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SCGB2B2Q4G0G5 96 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 CCNJQ5T5M9 372 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 HES5Q5TA89 166 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 HACD4Q5VWC8 232 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NXNL2Q5VZ03 156 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NUP54Q7Z3B4 507 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 OR7G1Q8NGA0 311 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 OR5H6Q8NGV6 325 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 COQ8AQ8NI60 647 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF296Q8WUU4 475 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 TANKQ92844 425 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 C7orf50Q9BRJ6 194 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 PRR14Q9BWN1 585 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ARL6Q9H0F7 186 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 FZD3Q9NPG1 666 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 PNO1Q9NRX1 252 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 RXFP3Q9NSD7 469 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ASB6Q9NWX5 421 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF443Q9Y2A4 671 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NAALAD2Q9Y3Q0 740 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 MN1Q10571 1320 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 CACNA1CQ13936 2221 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 A0A087WUU8 490 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 HMGN4O00479 90 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GYPBP06028 91 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GTF2F2P13984 249 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GRPRP30550 384 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 HTR1FP30939 366 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 TRIM23P36406 574 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 BMPR1AP36894 532 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 RBM34P42696 430 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 HYAL2Q12891 473 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 RUNX3Q13761 415 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GBX1Q14549 363 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 METTL11BQ5VVY1 283 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 C10orf111Q8N326 155 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 FAM109AQ8N4B1 249 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 CSNK1A1LQ8N752 337 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 KIAA1958Q8N8K9 716 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GATSQ8NAP1 163 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 INO80EQ8NBZ0 244 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 OR52N1Q8NH53 320 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 COQ10AQ96MF6 247 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 OR2M2Q96R28 347 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SERINC2Q96SA4 455 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 FAM83CQ9BQN1 747 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 TAPBPLQ9BX59 468 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ZDHHC5Q9C0B5 715 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 IL21Q9HBE4 155 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 HHATLQ9HCP6 504 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 CENPMQ9NSP4 180 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 COPS7AQ9UBW8 275 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 RGS17Q9UGC6 210 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 MUTYHQ9UIF7 546 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SCP2D1Q9UJQ7 156 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NDRG2Q9UN36 371 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SLC35A3Q9Y2D2 325 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 YARS2Q9Y2Z4 477 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms