RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GRHL3Q8TE85 626 aa8.81□□□□□ -1
CUX1-206ENST00000437600 MSANTD3Q96H12 275 aa8.81□□□□□ -1
CUX1-206ENST00000437600 PRRC1Q96M27 445 aa8.81□□□□□ -1
CUX1-206ENST00000437600 HSPA12BQ96MM6 686 aa8.81□□□□□ -1
CUX1-206ENST00000437600 LRRC61Q9BV99 259 aa8.81□□□□□ -1
CUX1-206ENST00000437600 FBXL4Q9UKA2 621 aa8.81□□□□□ -1
CUX1-206ENST00000437600 LSM2Q9Y333 95 aaKnown RBP8.81□□□□□ -1
CUX1-206ENST00000437600 KLK4Q9Y5K2 254 aa8.81□□□□□ -1
CUX1-206ENST00000437600 LAMA5O15230 3695 aa8.81□□□□□ -1
CUX1-206ENST00000437600 A0A0G2JPF8 293 aa8.8□□□□□ -1
CUX1-206ENST00000437600 GXYLT2A0PJZ3 443 aa8.8□□□□□ -1
CUX1-206ENST00000437600 HNRNPCL2B2RXH8 293 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CHURC1-FNTBB4DL54 471 aa8.8□□□□□ -1
CUX1-206ENST00000437600 HNRNPCL3B7ZW38 293 aa8.8□□□□□ -1
CUX1-206ENST00000437600 KCNJ13O60928 360 aa8.8□□□□□ -1
CUX1-206ENST00000437600 REM1O75628 298 aa8.8□□□□□ -1
CUX1-206ENST00000437600 HNRNPCL4P0DMR1 293 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CLUP10909 449 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CXCL12P48061 93 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SNRPGP62308 76 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 YPEL5P62699 121 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ABATP80404 500 aa8.8□□□□□ -1
CUX1-206ENST00000437600 MAT1AQ00266 395 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 SUZ12Q15022 739 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 KLHL12Q53G59 568 aa8.8□□□□□ -1
CUX1-206ENST00000437600 FRRS1Q6ZNA5 592 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ZNF367Q7RTV3 350 aa8.8□□□□□ -1
CUX1-206ENST00000437600 GDF7Q7Z4P5 450 aa8.8□□□□□ -1
CUX1-206ENST00000437600 LRRC25Q8N386 305 aaPredicted RBP8.8□□□□□ -1
CUX1-206ENST00000437600 CYB561A3Q8NBI2 242 aa8.8□□□□□ -1
CUX1-206ENST00000437600 KBTBD8Q8NFY9 601 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TEX47Q8TBZ9 253 aa8.8□□□□□ -1
CUX1-206ENST00000437600 RASSF5Q8WWW0 418 aa8.8□□□□□ -1
CUX1-206ENST00000437600 PTCHD1Q96NR3 888 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ORAI3Q9BRQ5 295 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TAPBPLQ9BX59 468 aa8.8□□□□□ -1
CUX1-206ENST00000437600 HCAR1Q9BXC0 346 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CCDC86Q9H6F5 360 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 DAPP1Q9UN19 280 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TMEM131Q92545 1883 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TP53BP1Q12888 1972 aaPredicted RBP8.8□□□□□ -1
CUX1-206ENST00000437600 NOTOA8MTQ0 251 aa8.8□□□□□ -1
CUX1-206ENST00000437600 LRRN3E7EW58 273 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TNFRSF10CO14798 259 aa8.8□□□□□ -1
CUX1-206ENST00000437600 MPZL2O60487 215 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TBX19O60806 448 aa8.8□□□□□ -1
CUX1-206ENST00000437600 GUCY1B2O75343 617 aa8.8□□□□□ -1
CUX1-206ENST00000437600 MRPL3P09001 348 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 TSPAN19P0C672 248 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ST6GAL1P15907 406 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SDHBP21912 280 aa8.8□□□□□ -1
CUX1-206ENST00000437600 GABRA3P34903 492 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SOX6P35712 828 aa8.8□□□□□ -1
CUX1-206ENST00000437600 UGT2B10P36537 528 aa8.8□□□□□ -1
CUX1-206ENST00000437600 MTNR1AP48039 350 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CSNK1EP49674 416 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 LIMK1P53667 647 aa8.8□□□□□ -1
CUX1-206ENST00000437600 HCCSP53701 268 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CDK5Q00535 292 aa8.8□□□□□ -1
CUX1-206ENST00000437600 HNRNPA0Q13151 305 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 NCF4Q15080 339 aa8.8□□□□□ -1
CUX1-206ENST00000437600 DEFB133Q30KQ1 61 aa8.8□□□□□ -1
CUX1-206ENST00000437600 MFSD12Q6NUT3 480 aa8.8□□□□□ -1
CUX1-206ENST00000437600 BHLHB9Q6PI77 547 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CPOQ8IVL8 374 aa8.8□□□□□ -1
CUX1-206ENST00000437600 UBALD2Q8IYN6 164 aa8.8□□□□□ -1
CUX1-206ENST00000437600 AVL9Q8NBF6 648 aa8.8□□□□□ -1
CUX1-206ENST00000437600 OR51L1Q8NGJ5 315 aa8.8□□□□□ -1
CUX1-206ENST00000437600 OR51G2Q8NGK0 314 aa8.8□□□□□ -1
CUX1-206ENST00000437600 OR9A4Q8NGU2 314 aa8.8□□□□□ -1
CUX1-206ENST00000437600 GPBAR1Q8TDU6 330 aa8.8□□□□□ -1
CUX1-206ENST00000437600 LMX1AQ8TE12 382 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ZDHHC1Q8WTX9 485 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ASB12Q8WXK4 309 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SDF2Q99470 211 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ACTRT3Q9BYD9 372 aa8.8□□□□□ -1
CUX1-206ENST00000437600 GSDMCQ9BYG8 508 aa8.8□□□□□ -1
CUX1-206ENST00000437600 LRRN3Q9H3W5 708 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ISG20L2Q9H9L3 353 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 FSCN3Q9NQT6 498 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CNOT2Q9NZN8 540 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 COMMD3Q9UBI1 195 aa8.8□□□□□ -1
CUX1-206ENST00000437600 PCOLCE2Q9UKZ9 415 aa8.8□□□□□ -1
CUX1-206ENST00000437600 K7ESF4 209 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ADAM11O75078 769 aa8.8□□□□□ -1
CUX1-206ENST00000437600 MED26O95402 600 aa8.8□□□□□ -1
CUX1-206ENST00000437600 CSF2P04141 144 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ACP2P11117 423 aa8.8□□□□□ -1
CUX1-206ENST00000437600 NDUFS1P28331 727 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SERPINB1P30740 379 aa8.8□□□□□ -1
CUX1-206ENST00000437600 OMPP47874 163 aa8.8□□□□□ -1
CUX1-206ENST00000437600 FNTBP49356 437 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SMSP52788 366 aa8.8□□□□□ -1
CUX1-206ENST00000437600 IFITM2Q01629 132 aa8.8□□□□□ -1
CUX1-206ENST00000437600 RGS1Q08116 209 aa8.8□□□□□ -1
CUX1-206ENST00000437600 MLC1Q15049 377 aa8.8□□□□□ -1
CUX1-206ENST00000437600 FAM214AQ32MH5 1076 aa8.8□□□□□ -1
CUX1-206ENST00000437600 PLBD1Q6P4A8 553 aa8.8□□□□□ -1
CUX1-206ENST00000437600 NRARPQ7Z6K4 114 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SPEM1Q8N4L4 309 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms