RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 IGFN1Q86VF2 1251 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GTPBP8Q8N3Z3 284 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 FAM46AQ96IP4 442 aaKnown RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GNG12Q9UBI6 72 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GJB5O95377 273 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF888P0CJ79 500 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GDF10P55107 478 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 NKX6-1P78426 367 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 DEFB110Q30KQ9 67 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ZMAT1Q5H9K5 638 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SLC16A14Q7RTX9 510 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SLC22A16Q86VW1 577 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GPR148Q8TDV2 347 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SAT2Q96F10 170 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 LMF1Q96S06 567 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SMOQ99835 787 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TM7SF3Q9NS93 570 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 FAM96BQ9Y3D0 163 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ATG4BQ9Y4P1 393 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 C20orf202A1L168 122 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 CD8B2A6NJW9 211 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 MED6O75586 246 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM63AO94886 807 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 CD8BP10966 210 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SIM1P81133 766 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 CDCA2Q69YH5 1023 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 OR4A16Q8NH70 328 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ACOT13Q9NPJ3 140 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 PTBP2Q9UKA9 531 aaKnown RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ANHXE9PGG2 379 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 CCL11P51671 97 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GNB2P62879 340 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 RAB33AQ14088 237 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SULF2Q8IWU5 870 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SAMD10Q9BYL1 202 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ATP13A2Q9NQ11 1180 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM45AQ9NWC5 275 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GABRQQ9UN88 632 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 STUB1Q9UNE7 303 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 NOSIPQ9Y314 301 aaKnown RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SCAMP2O15127 329 aaKnown RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 DNAJB5O75953 348 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 RAD52P43351 418 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 MEF2DQ14814 521 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SSX2Q16385 188 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 IL20RBQ6UXL0 311 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 OR52N2Q8NGI0 321 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 A0A1B0GV50 99 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 LCMT2O60294 686 aaKnown RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ETFAP13804 333 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 PRKAR1BP31321 381 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 AFF3P51826 1226 aaKnown RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 CYP1B1Q16678 543 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 SLC7A13Q8TCU3 470 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 FOLH1BQ9HBA9 442 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TEX10Q9NXF1 929 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TRAPPC2LQ9UL33 140 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 PLEKHM1Q9Y4G2 1056 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 DVL2O14641 736 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 SLC35F2Q8IXU6 374 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 FITM2Q8N6M3 262 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 PITHD1Q9GZP4 211 aaPredicted RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 XPNPEP1Q9NQW7 623 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 TESQ9UGI8 421 aaKnown RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF705FA8MVS1 300 aaPredicted RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF732B4DXR9 585 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 DNASE1P24855 282 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 PAX6P26367 422 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 MTNR1AP48039 350 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 PLA2G7Q13093 441 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 FAM182AQ5T1J6 154 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 LRFN5Q96NI6 719 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 NPY6RQ99463 290 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 INIPQ9NRY2 104 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF225Q9UK10 706 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 RPH3ALQ9UNE2 315 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 KDM4FA0A1W2PPD8 638 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 NFKBIEO00221 500 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 STC2O76061 302 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF728P0DKX0 622 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 MISPQ8IVT2 679 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 OR14A16Q8NHC5 309 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 NPRL2Q8WTW4 380 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 CHTF18Q8WVB6 975 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 INTS12Q96CB8 462 aaKnown RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 BPIFA2Q96DR5 249 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 CHFRQ96EP1 664 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF75AQ96N20 296 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 SMIM30A4D0T7 59 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF487B1APH4 448 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 B4GAT1O43505 415 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 GAAP10253 952 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 KDELR2P33947 212 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 MAP2K3P46734 347 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ERMP1Q7Z2K6 904 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 MCATQ8IVS2 390 aaKnown RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 SYT14Q8NB59 555 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms