RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RBMS1P29558 406 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CCR7P32248 378 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 STXBP1P61764 594 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 UBE2IP63279 158 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TLE2Q04725 743 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 EOGTQ5NDL2 527 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CD200R1LQ6Q8B3 271 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 FIP1L1Q6UN15 594 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TSPAN33Q86UF1 283 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 LDLRAD3Q86YD5 345 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 GPC2Q8N158 579 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 THAP6Q8TBB0 222 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 FUBP3Q96I24 572 aaKnown RBP eCLIP6.99□□□□□ -1.296e-7■■■■□ 22.1
CPSF6-202ENST00000435070 LRIG1Q96JA1 1093 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TEFMQ96QE5 360 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 MFFQ9GZY8 342 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZDHHC6Q9H6R6 413 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 SPHK1Q9NYA1 384 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 KLK11Q9UBX7 282 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 FCF1Q9Y324 198 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZFP37Q9Y6Q3 630 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 PHIPQ8WWQ0 1821 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 GMFGO60234 142 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TGM6O95932 706 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 SERPINA3P01011 423 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TACR2P21452 398 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 GAS1P54826 345 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 MEF2AQ02078 507 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 C2orf68Q2NKX9 166 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TCEAL5Q5H9L2 206 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 LRRC73Q5JTD7 316 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 C9orf152Q5JTZ5 239 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 REEP3Q6NUK4 255 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 MACC1Q6ZN28 852 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CHST14Q8NCH0 376 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 OR1M1Q8NGA1 313 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 OR5M9Q8NGP3 310 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 OR51Q1Q8NH59 317 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 XAGE5Q8WWM1 108 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ACOT12Q8WYK0 555 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TCEAL3Q969E4 200 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CHFRQ96EP1 664 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZBED3Q96IU2 234 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM231Q9H6L2 316 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 MED20Q9H944 212 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 KCNK12Q9HB15 430 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 GULP1Q9UBP9 304 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ALPK2Q86TB3 2170 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 A0A1W2PRB8 838 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 POM121BA6NF01 834 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 FAM25EA8MYX2 175 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF879B4DU55 563 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 E9PI62 339 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 FAAHO00519 579 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 POP7O75817 140 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 MRPL3P09001 348 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 RNF224P0DH78 156 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 PPP3CBP16298 524 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CCR8P51685 355 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 NFATC2Q13469 925 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF630Q2M218 657 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 DEFB115Q30KQ5 88 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 LRRC37A5PQ49AS3 106 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 SMARCD3Q6STE5 483 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 RFLNAQ6ZTI6 216 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 MON1AQ86VX9 555 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 WDR77Q9BQA1 342 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 C7orf50Q9BRJ6 194 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 IFT27Q9BW83 186 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 NOX3Q9HBY0 568 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CA5BQ9Y2D0 317 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 LRIT2A6NDA9 550 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SLC28A2O43868 658 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 REM1O75628 298 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PTAFRP25105 342 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 TAS2R50P59544 299 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SORDQ00796 357 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 MANEAQ5SRI9 462 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 HEPHL1Q6MZM0 1159 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CDK20Q8IZL9 346 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 OR10H4Q8NGA5 316 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SLC38A5Q8WUX1 472 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ACBD6Q9BR61 282 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 SYT17Q9BSW7 474 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ADARB2Q9NS39 739 aaKnown RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 AK6Q9Y3D8 172 aaKnown RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 RGS9O75916 674 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 MST1P26927 711 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 NSG1P42857 185 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PTGFRP43088 359 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 RAE1P78406 368 aaKnown RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 C5orf46Q6UWT4 87 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CERS6Q6ZMG9 384 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 MCATQ8IVS2 390 aaKnown RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 HORMAD2Q8N7B1 307 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 ELP4Q96EB1 424 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 CPNE2Q96FN4 548 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 HHIPQ96QV1 700 aa6.98□□□□□ -1.29
CPSF6-202ENST00000435070 PDGFDQ9GZP0 370 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-202ENST00000435070 OR51I1Q9H343 314 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms