RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 CPXM2Q8N436 756 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 RASGEF1AQ8N9B8 481 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 CHST14Q8NCH0 376 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 OR52B4Q8NGK2 314 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 PIGXQ8TBF5 258 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 KLF16Q9BXK1 252 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 NTMQ9P121 344 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 LIPT1Q9Y234 373 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 PCDHGA9Q9Y5G4 932 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 FEZF1A0PJY2 475 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 HYAL3O43820 417 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 PRKRAO75569 313 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 OR5F1O95221 314 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 EPPINO95925 133 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 UCHL1P09936 223 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 ATF1P18846 271 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 PSMB1P20618 241 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 PDZD9Q8IXQ8 264 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 ANKRD53Q8N9V6 530 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 BVESQ8NE79 360 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 OR11G2Q8NGC1 345 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 LRRC46Q96FV0 321 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 DMRTA2Q96SC8 542 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 C12orf57Q99622 126 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF649Q9BS31 505 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 SYNDIG1Q9H7V2 258 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 NOX3Q9HBY0 568 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 KLK11Q9UBX7 282 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 GPR55Q9Y2T6 319 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 MCRIP1C9JLW8 97 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 FOXE1O00358 373 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 PLPP1O14494 284 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 PRG2P13727 222 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 UGT2B7P16662 529 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 HTR1FP30939 366 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 S100A11P31949 105 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 MMP15P51511 669 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF311Q5JNZ3 666 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 C18orf63Q68DL7 685 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 Q6ZVU0 165 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 VRK2Q86Y07 508 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 KCTD12Q96CX2 325 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 C4orf36Q96KX1 117 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 PTPN18Q99952 460 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 UQCC2Q9BRT2 126 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 ZMAT5Q9UDW3 170 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 MLXQ9UH92 298 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 HELZP42694 1942 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 OR6C74A6NCV1 312 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 KCNJ13O60928 360 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 SDC3O75056 442 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 CHRM4P08173 479 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 ADRB1P08588 477 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 AKR1A1P14550 325 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 OR12D2P58182 307 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 FZD5Q13467 585 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 ELP2Q6IA86 826 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 NXPE4Q6UWF7 544 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF783Q6ZMS7 281 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 OVCH2Q7RTZ1 564 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC9B2Q86UD5 537 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 LINC00471Q8N535 108 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF433Q8N7K0 673 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 CLRN3Q8NCR9 226 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 OSTF1Q92882 214 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 SPATA5L1Q9BVQ7 753 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 AHSPQ9NZD4 102 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 PLSCR5A0PG75 271 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 A8MXK9 166 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 NPC1O15118 1278 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 C8orf89P0DMQ9 161 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC11A1P49279 550 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 PGGHGQ32M88 737 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 METTL11BQ5VVY1 283 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 TRAPPC5Q8IUR0 188 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 OR2T33Q8NG76 320 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 TM4SF18Q96CE8 201 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 NDC1Q9BTX1 674 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF768Q9H5H4 540 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 NEUROD4Q9HD90 331 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 HRASLSQ9HDD0 168 aa10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 SIRT3Q9NTG7 399 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-202ENST00000433297 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 SUSD5O60279 629 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 C1orf105O95561 183 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 GYPBP06028 91 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 TRHRP34981 398 aaPredicted RBP10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 CCR9P51686 369 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 CLDN12P56749 244 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 TMEM115Q12893 351 aaPredicted RBP10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 TRAM2Q15035 370 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF750Q32MQ0 723 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 HES5Q5TA89 166 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 TMUB2Q71RG4 321 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 PAQR7Q86WK9 346 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 HDDC3Q8N4P3 179 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 NLGN2Q8NFZ4 835 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 SCARB1Q8WTV0 552 aa10.77□□□□□ -0.68
HMGCS1-202ENST00000433297 AUTS2Q8WXX7 1259 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms