RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 ZCCHC12Q6PEW1 402 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 NPSR1Q6W5P4 371 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.24□□□□□ -0.93
HOXD3-203ENST00000432796 CROCCP2Q86T23 111 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 CNEP1R1Q8N9A8 125 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 ZNF527Q8NB42 609 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 NUP43Q8NFH3 380 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 ARL8AQ96BM9 186 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 MOAP1Q96BY2 351 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 INTS12Q96CB8 462 aaKnown RBP9.24□□□□□ -0.93
HOXD3-203ENST00000432796 C11orf24Q96F05 449 aaPredicted RBP9.24□□□□□ -0.93
HOXD3-203ENST00000432796 TUBA1CQ9BQE3 449 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 SLC39A3Q9BRY0 314 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 GATA5Q9BWX5 397 aaPredicted RBP9.24□□□□□ -0.93
HOXD3-203ENST00000432796 DSN1Q9H410 356 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 ACSS1Q9NUB1 689 aaPredicted RBP9.24□□□□□ -0.93
HOXD3-203ENST00000432796 PAQR5Q9NXK6 330 aaPredicted RBP9.24□□□□□ -0.93
HOXD3-203ENST00000432796 FBXL2Q9UKC9 423 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 FAF1Q9UNN5 650 aaPredicted RBP9.24□□□□□ -0.93
HOXD3-203ENST00000432796 SNX8Q9Y5X2 465 aa9.24□□□□□ -0.93
HOXD3-203ENST00000432796 RAI1Q7Z5J4 1906 aaPredicted RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 DSCAMO60469 2012 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 A0A087WZY1 265 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 CFLARO15519 480 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 GPRIN2O60269 458 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 SNUPNO95149 360 aaKnown RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 UTS2O95399 124 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 ZNF708P17019 499 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 ACVR1BP36896 505 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 RPS4XP62701 263 aaKnown RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 FAM27E3Q08E93 113 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 GLYR1Q49A26 553 aaPredicted RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 DCST1Q5T197 706 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 DNM1P46Q6ZS02 220 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 TRABD2AQ86V40 505 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 ZNF611Q8N823 705 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 FNDC5Q8NAU1 212 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 OR56A1Q8NGH5 318 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 CLHC1Q8NHS4 586 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 AGR3Q8TD06 166 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 TRMT61AQ96FX7 289 aaKnown RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 REXO5Q96IC2 774 aaKnown RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 SLCO5A1Q9H2Y9 848 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 ZCCHC3Q9NUD5 404 aaKnown RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 MED11Q9P086 117 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 MCTS1Q9ULC4 181 aaKnown RBP9.23□□□□□ -0.93
HOXD3-203ENST00000432796 EMC9Q9Y3B6 208 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 TRAF6Q9Y4K3 522 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 AP4B1Q9Y6B7 739 aa9.23□□□□□ -0.93
HOXD3-203ENST00000432796 GJE1A6NN92 205 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 PIP5K1BO14986 540 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 LSM1O15116 133 aaKnown RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 SCAMP2O15127 329 aaKnown RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 RGS16O15492 202 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 TBX19O60806 448 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 SPAG7O75391 227 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 SKAP2O75563 359 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 SLU7O95391 586 aaKnown RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 SYNGR4O95473 234 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ANGPTL1O95841 491 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 NUDT14O95848 222 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ZNF17P17021 662 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 SDC1P18827 310 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ALDH3A1P30838 453 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 CCKARP32238 428 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 SOAT1P35610 550 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 STARP49675 285 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 LHX2P50458 406 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 CASP9P55211 416 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 GFRA1P56159 465 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 CTBP2P56545 445 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 POU6F2P78424 691 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 TMEM249Q2WGJ8 235 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 KRT71Q3SY84 523 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ARL13AQ5H913 290 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 CPTPQ5TA50 214 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 DESI1Q6ICB0 168 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ANKRD26P1Q6NSI1 321 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ZNF704Q6ZNC4 412 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ZNF551Q7Z340 670 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 STK32CQ86UX6 486 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 WDR75Q8IWA0 830 aaKnown RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 GCNT2Q8N0V5 402 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 BANPQ8N9N5 519 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 OR2M3Q8NG83 312 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 OR4N2Q8NGD1 307 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 OR2W6PQ8NHA6 318 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 TCP10LQ8TDR4 215 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ADAMTS15Q8TE58 950 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 DUSP19Q8WTR2 217 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 CIDECQ96AQ7 238 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ZBTB8AQ96BR9 441 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 TUBGCP3Q96CW5 907 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 C1GALT1C1Q96EU7 318 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ZNF845Q96IR2 970 aaPredicted RBP9.22□□□□□ -0.93
HOXD3-203ENST00000432796 UCN2Q96RP3 112 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 PINK1Q9BXM7 581 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 HOXD1Q9GZZ0 328 aa9.22□□□□□ -0.93
HOXD3-203ENST00000432796 ESRP2Q9H6T0 727 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms