RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ATG4DQ86TL0 474 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 COX18Q8N8Q8 333 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 RFWD2Q8NHY2 731 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF524Q96C55 264 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 C1orf50Q9BV19 199 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 EMC9Q9Y3B6 208 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 DNAJC15Q9Y5T4 150 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 NUP214P35658 2090 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 ROS1P08922 2347 aa12.75□□□□□ -0.37
SMARCE1-205ENST00000431889 FN1P02751 2386 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 IGLV3-32A0A0A0MS00 114 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 IGHV3-15A0A0B4J1V0 119 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ALG1L2C9J202 215 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 NPIPB8E9PQR5 432 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 PIP5K1BO14986 540 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 LSM1O15116 133 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ARHGEF9O43307 516 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 KLF4O43474 513 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 SLITRK5O94991 958 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 GOSR1O95249 250 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ALOX5P09917 674 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 HPGDP15428 266 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ALDH3A1P30838 453 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 FOXF1Q12946 379 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 TOMM34Q15785 309 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 HBMQ6B0K9 141 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 CBLN3Q6UW01 205 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 WDR75Q8IWA0 830 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 LILRA2Q8N149 483 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 CLEC4FQ8N1N0 589 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 CDRT4Q8N9R6 151 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 MAPK1IP1LQ8NDC0 245 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ABHD3Q8WU67 409 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 TWIST2Q8WVJ9 160 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 PIGTQ969N2 578 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 FAM120BQ96EK7 910 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ZBED6CLQ96FA7 236 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 PLPPR2Q96GM1 343 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ADGRG7Q96K78 797 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 MS4A4EQ96PG1 132 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 SRXN1Q9BYN0 137 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 SIRT3Q9NTG7 399 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ZCCHC3Q9NUD5 404 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 SLC17A7Q9P2U7 560 aa12.74□□□□□ -0.37
SMARCE1-205ENST00000431889 ABCA2Q9BZC7 2435 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 C9JVG2 144 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 SCDO00767 359 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 EFNA2O43921 213 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PEX11AO75192 247 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 SYNGR4O95473 234 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 NUDT14O95848 222 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 HMGN2P05204 90 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 HEXAP06865 529 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 LAMP1P11279 417 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 BCKDHAP12694 445 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PSMA4P25789 261 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 CASP9P55211 416 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF117Q03924 483 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 KANK2Q63ZY3 851 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 CDC73Q6P1J9 531 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 LRIG3Q6UXM1 1119 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 NUFIP2Q7Z417 695 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 KRTCAP2Q8N6L1 136 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF614Q8N883 585 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 OR5AK3PQ8NH89 298 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 CEP70Q8NHQ1 597 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ZFP28Q8NHY6 868 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 FAM110BQ8TC76 370 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PHOSPHO1Q8TCT1 267 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 OSTF1Q92882 214 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF775Q96BV0 537 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 C3orf30Q96M34 536 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 CCT7Q99832 543 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ACTR6Q9GZN1 396 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ANKZF1Q9H8Y5 726 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 CARD8Q9Y2G2 431 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 FREM1Q5H8C1 2179 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 SS18L1O75177 396 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 SKAP2O75563 359 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 SLU7O95391 586 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PRPH2P23942 346 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PTH2RP49190 550 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 POU6F2P78424 691 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF844Q08AG5 666 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 TP53BP2Q13625 1128 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PDE7AQ13946 482 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PTGR1Q14914 329 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 GLYR1Q49A26 553 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 VPS26BQ4G0F5 336 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ARL13AQ5H913 290 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 CPTPQ5TA50 214 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 ZNF704Q6ZNC4 412 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 PRIMA1Q86XR5 153 aa12.73□□□□□ -0.37
SMARCE1-205ENST00000431889 GTPBP8Q8N3Z3 284 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms