RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 RPH3AQ9Y2J0 694 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-203ENST00000431127 DTNAQ9Y4J8 743 aa15.76■□□□□ 0.11
CTDSP1-203ENST00000431127 FAM215AQ9Y5M1 114 aa15.76■□□□□ 0.11
CTDSP1-203ENST00000431127 KLF2Q9Y5W3 355 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-203ENST00000431127 TEX15Q9BXT5 2789 aa15.76■□□□□ 0.11
CTDSP1-203ENST00000431127 NOTCH2Q04721 2471 aa15.76■□□□□ 0.11
CTDSP1-203ENST00000431127 GTPBP1O00178 669 aaKnown RBP15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 HMGN4O00479 90 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 NR5A2O00482 541 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 HCRTR2O43614 444 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 FREM3P0C091 2139 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 MDH1P40925 334 aaKnown RBP15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF41P51814 821 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 GPR68Q15743 365 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF141Q15928 474 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 BCL2A1Q16548 175 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 AGKQ53H12 422 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 RAET1LQ5VY80 246 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 RTL6Q6ICC9 239 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 DNAJC14Q6Y2X3 702 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 NCCRP1Q6ZVX7 275 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 B4GALNT2Q8NHY0 566 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 ZPLD1Q8TCW7 415 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 ASB5Q8WWX0 329 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 TRNT1Q96Q11 434 aaKnown RBP15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 TPT1P8Q9HAU6 139 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 THUMPD1Q9NXG2 353 aaKnown RBP15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 STOML1Q9UBI4 398 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 WDR45Q9Y484 360 aa15.75■□□□□ 0.11
CTDSP1-203ENST00000431127 A0A096LPI6 279 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 NPIPA5A0A0B4J1W7 369 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 NPIPA7E9PJI5 369 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 KIAA0513O60268 411 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 FCMRO60667 390 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 CLDN14O95500 239 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 EPPINO95925 133 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 NPIPA8P0DM63 369 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 GLI4P10075 376 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 CHRNB4P30926 498 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 SUMO3P55854 103 aaPredicted RBP15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 NUP107P57740 925 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 B3GALT5-AS1P59052 145 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 CD226Q15762 336 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 ACSF3Q4G176 576 aaPredicted RBP15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 GPAT3Q53EU6 434 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 DCST1Q5T197 706 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 SLC2A7Q6PXP3 512 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 LACC1Q8IV20 430 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 RPRMLQ8N4K4 120 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF614Q8N883 585 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 OR10Q1Q8NGQ4 319 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 CA5BP1Q8WTZ4 195 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 PMM1Q92871 262 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 SDCCAG3Q96C92 435 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 TMEM120AQ9BXJ8 343 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 SAP130Q9H0E3 1048 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 RAD21L1Q9H4I0 556 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 SLC6A13Q9NSD5 602 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 MKLN1Q9UL63 735 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 PCNX1Q96RV3 2341 aa15.74■□□□□ 0.11
CTDSP1-203ENST00000431127 SERINC4A6NH21 518 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 H0Y3Z8 333 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 GMFGO60234 142 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 EIF4E2O60573 245 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 PEPDP12955 493 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF17P17021 662 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 TCEA1P23193 301 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 CRATP43155 626 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 LHX2P50458 406 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 P2RX1P51575 399 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 COX20Q5RI15 118 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 PDZK1Q5T2W1 519 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 RIPPLY2Q5TAB7 128 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 NSUN5P2Q63ZY6 315 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 ARSKQ6UWY0 536 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF619Q8N2I2 560 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 PNPT1Q8TCS8 783 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 TSPEARQ8WU66 669 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 ZBTB8AQ96BR9 441 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 SH3YL1Q96HL8 342 aaPredicted RBP15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 PAIP1Q9H074 479 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF385DQ9H6B1 395 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 CALHM2Q9HA72 323 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 SLC52A3Q9NQ40 469 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 PCDHB14Q9Y5E9 798 aa15.73■□□□□ 0.11
CTDSP1-203ENST00000431127 A0A1W2PP18 115 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 OR2M5A3KFT3 312 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 C7orf72A4D263 438 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 CD8B2A6NJW9 211 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF264O43296 627 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 UGT2B17O75795 530 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 H6PDO95479 791 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 C1QCP02747 245 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 NR2F1P10589 423 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 UBL4AP11441 157 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 ZNF708P17019 499 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 POU3F2P20265 443 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 CAPN3P20807 821 aa15.72■□□□□ 0.11
CTDSP1-203ENST00000431127 COL8A1P27658 744 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms