RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ZNF17P17021 662 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 TBXA2RP21731 343 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 DNASE1P24855 282 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 UGT2B10P36537 528 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 HPCAL1P37235 193 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 CD79BP40259 229 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 DIO3P55073 304 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 PLAURQ03405 335 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 TOMM34Q15785 309 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-202ENST00000430200 DEFB113Q30KQ7 82 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 CLECL1Q8IZS7 167 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 GTPBP8Q8N3Z3 284 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-202ENST00000430200 COX18Q8N8Q8 333 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 ZNF610Q8N9Z0 462 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 OR5D16Q8NGK9 328 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 OR10D3Q8NH80 312 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 GOT1L1Q8NHS2 421 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-202ENST00000430200 ZFP28Q8NHY6 868 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 PSMA8Q8TAA3 256 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 TRIM44Q96DX7 344 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-202ENST00000430200 MTERF3Q96E29 417 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 LRRC46Q96FV0 321 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 PGM2Q96G03 612 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 POM121Q96HA1 1249 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 PPP1R36Q96LQ0 422 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 DACH2Q96NX9 599 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 SRXN1Q9BYN0 137 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 KCNE5Q9UJ90 142 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 TMED5Q9Y3A6 229 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 ZNF175Q9Y473 711 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 C7orf72A4D263 438 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 TNFSF11O14788 317 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 NDUFB5O43674 189 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 CXCL13O43927 109 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 BCAS1O75363 584 aaPredicted RBP10.55□□□□□ -0.72
HDAC4-202ENST00000430200 CRHP06850 196 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 ALOX5P09917 674 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 G6PDP11413 515 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 CD99P14209 185 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 HOXB4P17483 251 aaPredicted RBP10.55□□□□□ -0.72
HDAC4-202ENST00000430200 ASMTP46597 345 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 EIF1AXP47813 144 aaKnown RBP10.55□□□□□ -0.72
HDAC4-202ENST00000430200 HBA1P69905 142 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 C17orf67Q0P5P2 114 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 FUT5Q11128 374 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 TP53BP2Q13625 1128 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 MPP2Q14168 576 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 MLC1Q15049 377 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 IL23RQ5VWK5 629 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 ANKRD34AQ69YU3 496 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 CDC73Q6P1J9 531 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 ZNF781Q8N8C0 355 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC4-202ENST00000430200 CAVIN3Q969G5 261 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 SORT1Q99523 831 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 IQCGQ9H095 443 aaKnown RBP10.55□□□□□ -0.72
HDAC4-202ENST00000430200 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 PTGES2Q9H7Z7 377 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 COQ10BQ9H8M1 238 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 SDHAF3Q9NRP4 125 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 SNX8Q9Y5X2 465 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 AP4B1Q9Y6B7 739 aa10.55□□□□□ -0.72
HDAC4-202ENST00000430200 CADP27708 2225 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 A0A1W2PQD3 144 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 TTC36A6NLP5 189 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 ESPNB1AK53 854 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 SS18L1O75177 396 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-202ENST00000430200 NTN1O95631 604 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 CHEK2O96017 543 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 CD8BP10966 210 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 CRYGSP22914 178 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 EDNRAP25101 427 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 HOXC12P31275 282 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 SERPINB4P48594 390 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 PSMD4P55036 377 aaKnown RBP10.54□□□□□ -0.72
HDAC4-202ENST00000430200 CASP9P55211 416 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 PHC1P78364 1004 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 POU6F2P78424 691 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-202ENST00000430200 PDCD2Q16342 344 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-202ENST00000430200 GLYR1Q49A26 553 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-202ENST00000430200 VPS26BQ4G0F5 336 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 ATP6AP1LQ52LC2 224 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 DCST2Q5T1A1 773 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 FBXW10Q5XX13 1052 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 OR2A2Q6IF42 318 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 PPP4R4Q6NUP7 873 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 FAM214BQ7L5A3 538 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 CNPY4Q8N129 248 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 FNDC5Q8NAU1 212 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 CEP70Q8NHQ1 597 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 COQ8BQ96D53 544 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 ZC3HAV1LQ96H79 300 aaKnown RBP10.54□□□□□ -0.72
HDAC4-202ENST00000430200 PPP3R2Q96LZ3 170 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 BTBD2Q9BX70 525 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 PIGUQ9H490 435 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 DUSP22Q9NRW4 184 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 MRTO4Q9UKD2 239 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms