RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ANXA3P12429 323 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 PNLIPP16233 465 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 LSSP48449 732 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 GZMMP51124 257 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 CFHR1Q03591 330 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 PRDX1Q06830 199 aaKnown RBP10.66□□□□□ -0.7
CECR3-201ENST00000428828 DOC2AQ14183 400 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 SSX1Q16384 188 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 ZNF628Q5EBL2 1059 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 PRAMEF9Q5VWM5 478 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 RNLSQ5VYX0 342 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 CD276Q5ZPR3 534 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 TRIQKQ629K1 86 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 KLHL17Q6TDP4 642 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 FIP1L1Q6UN15 594 aaKnown RBP10.66□□□□□ -0.7
CECR3-201ENST00000428828 MILR1Q7Z6M3 343 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 DEFB124Q8NES8 71 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 OR10A6Q8NH74 314 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 BAHD1Q8TBE0 780 aaPredicted RBP10.66□□□□□ -0.7
CECR3-201ENST00000428828 SLC13A3Q8WWT9 602 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 RIT1Q92963 219 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 UCN3Q969E3 161 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 EPYCQ99645 322 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 NPAS1Q99742 590 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 DPH7Q9BTV6 452 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 PRR14Q9BWN1 585 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 LRRN3Q9H3W5 708 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 SDHAF2Q9NX18 166 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 PDP1Q9P0J1 537 aaPredicted RBP10.66□□□□□ -0.7
CECR3-201ENST00000428828 ZNF225Q9UK10 706 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 MRPS7Q9Y2R9 242 aaKnown RBP10.66□□□□□ -0.7
CECR3-201ENST00000428828 ENTPD2Q9Y5L3 495 aa10.66□□□□□ -0.7
CECR3-201ENST00000428828 A0A0J9YY10 115 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 FEZF1A0PJY2 475 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 GATCO43716 136 aaKnown RBP10.65□□□□□ -0.7
CECR3-201ENST00000428828 PRAMEF10O60809 474 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 APOL3O95236 402 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 CLDN9O95484 217 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 TP53P04637 393 aaPredicted RBP10.65□□□□□ -0.7
CECR3-201ENST00000428828 STSP08842 583 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 CD22P20273 847 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 ACP1P24666 158 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 PSMA1P25786 263 aaKnown RBP10.65□□□□□ -0.7
CECR3-201ENST00000428828 ERVPABLB-1P60509 514 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 PUDPQ08623 228 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 ST3GAL4Q11206 333 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 TP53BP2Q13625 1128 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 SLBPQ14493 270 aaKnown RBP eCLIP10.65□□□□□ -0.7
CECR3-201ENST00000428828 CPSF6Q16630 551 aaKnown RBP eCLIP10.65□□□□□ -0.7
CECR3-201ENST00000428828 TSTQ16762 297 aaKnown RBP10.65□□□□□ -0.7
CECR3-201ENST00000428828 KLHL22Q53GT1 634 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 FAM209BQ5JX69 171 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 NXPE4Q6UWF7 544 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 TMPRSS9Q7Z410 1059 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 ZNF605Q86T29 641 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 SLC9A6Q92581 669 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 ZDHHC12Q96GR4 267 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 LINC00052Q96N35 136 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 GFM1Q96RP9 751 aaKnown RBP10.65□□□□□ -0.7
CECR3-201ENST00000428828 ZNF382Q96SR6 550 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 ELOVL6Q9H5J4 265 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 PPP1R3EQ9H7J1 279 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 ABCB9Q9NP78 766 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 SLC35C2Q9NQQ7 365 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 GPRC5BQ9NZH0 403 aa10.65□□□□□ -0.7
CECR3-201ENST00000428828 SCN3AQ9NY46 2000 aa10.65□□□□□ -0.71
CECR3-201ENST00000428828 SLC22A23A1A5C7 686 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 SLC9B1P1A6NJY1 282 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 SMLR1H3BR10 107 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 TNFSF14O43557 240 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 MPZL2O60487 215 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 STATHP02808 62 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 C1GALT1C1LP0DN25 315 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ST6GAL1P15907 406 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 EPHA2P29317 976 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 CCR8P51685 355 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ITGA1P56199 1179 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 PPP3R1P63098 170 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 PPP1R8Q12972 351 aaKnown RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 SLC5A12Q1EHB4 618 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 PYDC2Q56P42 97 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ERICH5Q6P6B1 374 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 SLCO4C1Q6ZQN7 724 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 FAM129CQ86XR2 697 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 PLXDC1Q8IUK5 500 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ATG16L2Q8NAA4 619 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ZNF740Q8NDX6 193 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 OR4D10Q8NGI6 311 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 MTFMTQ96DP5 389 aaKnown RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 ZBED6CLQ96FA7 236 aaPredicted RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 DIRAS2Q96HU8 199 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ZBTB18Q99592 522 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 BARD1Q99728 777 aaKnown RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 CDC6Q99741 560 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 TMEM43Q9BTV4 400 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 THUMPD3Q9BV44 507 aaKnown RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 ACTL8Q9H568 366 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ANKRA2Q9H9E1 313 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 SOHLH2Q9NX45 425 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 KCMF1Q9P0J7 381 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms