RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SKAP2O75563 359 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 HMGN2P05204 90 aaKnown RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 HOXC12P31275 282 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 PCYT1AP49585 367 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 CTBP2P56545 445 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 POU6F2P78424 691 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 NKX6-1P78426 367 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 CD226Q15762 336 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 CTU2Q2VPK5 515 aaKnown RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 CXorf67Q86X51 503 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 WDR75Q8IWA0 830 aaKnown RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 GTPBP8Q8N3Z3 284 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 FAM110BQ8TC76 370 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 CDS1Q92903 461 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 EML4Q9HC35 981 aaKnown RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 UBQLN4Q9NRR5 601 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 MED17Q9NVC6 651 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 GIN1Q9NXP7 522 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 EMC9Q9Y3B6 208 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 MAP1AP78559 2803 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-209ENST00000428728 NF1P21359 2839 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 FREM1Q5H8C1 2179 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 PRR14LQ5THK1 2151 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 NPIPA5A0A0B4J1W7 369 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 NPIPA7E9PJI5 369 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 SYNGR4O95473 234 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 NPIPA8P0DM63 369 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 FOSL1P15407 271 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 HOXB4P17483 251 aaPredicted RBP15.31■□□□□ 0.04
TRIM39-209ENST00000428728 DDX5P17844 614 aaKnown RBP15.31■□□□□ 0.04
TRIM39-209ENST00000428728 ME2P23368 584 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 MAPK1P28482 360 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 SERPINB4P48594 390 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 OCRLQ01968 901 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 IFFO1Q0D2I5 559 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 TP53BP2Q13625 1128 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 PTGR1Q14914 329 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 UGT3A2Q3SY77 523 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 ATP6AP1LQ52LC2 224 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 ZCCHC12Q6PEW1 402 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 LRIG3Q6UXM1 1119 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 RIBC1Q8N443 379 aaPredicted RBP15.31■□□□□ 0.04
TRIM39-209ENST00000428728 OR6K3Q8NGY3 331 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 ZBTB8AQ96BR9 441 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 ADGRG7Q96K78 797 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 PPP3R2Q96LZ3 170 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 HS3ST6Q96QI5 342 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 SMR3AQ99954 134 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 BTBD2Q9BX70 525 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 HHATLQ9HCP6 504 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 ATP6V1HQ9UI12 483 aa15.31■□□□□ 0.04
TRIM39-209ENST00000428728 MCTS1Q9ULC4 181 aaKnown RBP15.31■□□□□ 0.04
TRIM39-209ENST00000428728 SLU7O95391 586 aaKnown RBP15.3■□□□□ 0.04
TRIM39-209ENST00000428728 FGF4P08620 206 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 LAMP1P11279 417 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 ARRB2P32121 409 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 SFTPDP35247 375 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 ZNF117Q03924 483 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 FOXF1Q12946 379 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 SPDYE7PQ495Y7 208 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 XKR7Q5GH72 579 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 Q5PR19 223 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 EXOSC6Q5RKV6 272 aaKnown RBP15.3■□□□□ 0.04
TRIM39-209ENST00000428728 Q71RC1 249 aaPredicted RBP15.3■□□□□ 0.04
TRIM39-209ENST00000428728 P3H2Q8IVL5 708 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 MISPQ8IVT2 679 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 OR2V1Q8NHB1 315 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 B4GALNT2Q8NHY0 566 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 PHOSPHO1Q8TCT1 267 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 TCP10LQ8TDR4 215 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 NUDT8Q8WV74 236 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRIM39-209ENST00000428728 GMPPAQ96IJ6 420 aaPredicted RBP15.3■□□□□ 0.04
TRIM39-209ENST00000428728 CCL19Q99731 98 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 ANKZF1Q9H8Y5 726 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 L2HGDHQ9H9P8 463 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 DUSP22Q9NRW4 184 aa15.3■□□□□ 0.04
TRIM39-209ENST00000428728 A0A0J9YW62 118 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 A0A1W2PQD3 144 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 C7orf72A4D263 438 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 SMPD2O60906 423 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 SS18L1O75177 396 aaPredicted RBP15.29■□□□□ 0.04
TRIM39-209ENST00000428728 NUDT14O95848 222 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 C6orf47O95873 294 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 ATP6V1C1P21283 382 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 PSMA4P25789 261 aaKnown RBP15.29■□□□□ 0.04
TRIM39-209ENST00000428728 SHC1P29353 583 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 ADSLP30566 484 aaPredicted RBP15.29■□□□□ 0.04
TRIM39-209ENST00000428728 LCN1P31025 176 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 RPL3P39023 403 aaKnown RBP15.29■□□□□ 0.04
TRIM39-209ENST00000428728 RAC1P63000 192 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 MLC1Q15049 377 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 KRTAP21-3Q3LHN1 58 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 SHEQ5VZ18 495 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 HBMQ6B0K9 141 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 CDC73Q6P1J9 531 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 C22orf34Q6ZV56 151 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 KRTCAP2Q8N6L1 136 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 ZNF614Q8N883 585 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 FNDC5Q8NAU1 212 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms