RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 C17orf64Q86WR6 236 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 OOSP2Q86WS3 158 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 KMT5CQ86Y97 462 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 CRLF3Q8IUI8 442 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 RAB42Q8N4Z0 105 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 C2orf73Q8N5S3 287 aaPredicted RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 EID2Q8N6I1 236 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 GBP7Q8N8V2 638 aaPredicted RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 RFWD2Q8NHY2 731 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TMEM163Q8TC26 289 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TWIST2Q8WVJ9 160 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SMIM10Q96HG1 83 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 PRAP1Q96NZ9 151 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 OR52B2Q96RD2 323 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 PRPF18Q99633 342 aaKnown RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 PAIP2Q9BPZ3 127 aaKnown RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 EBF4Q9BQW3 602 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 DPH7Q9BTV6 452 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ACPTQ9BZG2 426 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SLC25A18Q9H1K4 315 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 ACTL8Q9H568 366 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 POLR1BQ9H9Y6 1135 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 BRF2Q9HAW0 419 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 FAM60AQ9NP50 221 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 MID1IP1Q9NPA3 183 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SLC52A3Q9NQ40 469 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 FARSBQ9NSD9 589 aaKnown RBP5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SNX7Q9UNH6 387 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 TIMM22Q9Y584 194 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 USH1CQ9Y6N9 552 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 AP1M2Q9Y6Q5 423 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 PCM1Q15154 2024 aa5.07□□□□□ -1.6
C9orf3-205ENST00000427193 SPTBP11277 2137 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 IGHV5-10-1A0A0J9YXX1 117 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 LRIT2A6NDA9 550 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 C4orf51C9J302 202 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 D6RAR5 112 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 HAT1O14929 419 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 LSM1O15116 133 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 KRT36O76013 467 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 SEMA3DO95025 777 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CCNDBP1O95273 360 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CPNE6O95741 557 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 PDYNP01213 254 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 SERPINA6P08185 405 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 EZRP15311 586 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 NELFEP18615 380 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CMPK1P30085 196 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 SERPINB1P30740 379 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 ZFP36L2P47974 494 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 DUSP3P51452 185 aaPredicted RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CCNG1P51959 295 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 AQP5P55064 265 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CUL3Q13618 768 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 KRT33BQ14525 404 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 NAA25Q14CX7 972 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 ZNF672Q499Z4 452 aaPredicted RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 XKR6Q5GH73 641 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 PAGE2BQ5JRK9 111 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 C6orf136Q5SQH8 315 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 OTUD3Q5T2D3 398 aaPredicted RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 NKAIN2Q5VXU1 208 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 METTL21CQ5VZV1 264 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 MED27Q6P2C8 311 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 FIGLAQ6QHK4 219 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 C6orf89Q6UWU4 347 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 EFL1Q7Z2Z2 1120 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 TMPRSS11BQ86T26 416 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 TRIM73Q86UV7 250 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CPSF7Q8N684 471 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 HORMAD2Q8N7B1 307 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 BMPERQ8N8U9 685 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 MFSD9Q8NBP5 474 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 OR4D9Q8NGE8 314 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 HUS1BQ8NHY5 278 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 METTL6Q8TCB7 284 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 NT5CQ8TCD5 201 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 DYDC1Q8WWB3 177 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 C19orf60Q96EN9 201 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CCNL2Q96S94 520 aaPredicted RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 MAP3K3Q99759 626 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CCDC3Q9BQI4 270 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 CCDC28BQ9BUN5 200 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 ACAT2Q9BWD1 397 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 MS4A8Q9BY19 250 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 NUF2Q9BZD4 464 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 SHCBP1LQ9BZQ2 653 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 ADNPQ9H2P0 1102 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 LRRN3Q9H3W5 708 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 ACTR8Q9H981 624 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 Q9N2J8 555 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 MRPS30Q9NP92 439 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 LIN7CQ9NUP9 197 aaKnown RBP5.06□□□□□ -1.6
C9orf3-205ENST00000427193 TMEM9Q9P0T7 183 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 ANAPC2Q9UJX6 822 aa5.06□□□□□ -1.6
C9orf3-205ENST00000427193 A0A1W2PNU3 283 aaPredicted RBP5.05□□□□□ -1.6
C9orf3-205ENST00000427193 SLC9B1P1A6NJY1 282 aa5.05□□□□□ -1.6
C9orf3-205ENST00000427193 TRPC5OSA6NMA1 111 aa5.05□□□□□ -1.6
C9orf3-205ENST00000427193 MAGEB17A8MXT2 336 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms