RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 KLHL17Q6TDP4 642 aa12.52□□□□□ -0.41
HDAC6-206ENST00000426196 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
HDAC6-206ENST00000426196 CTAGE4Q8IX94 777 aa12.52□□□□□ -0.41
HDAC6-206ENST00000426196 C1orf52Q8N6N3 182 aaKnown RBP12.52□□□□□ -0.41
HDAC6-206ENST00000426196 PYROXD1Q8WU10 500 aa12.52□□□□□ -0.41
HDAC6-206ENST00000426196 NMRK1Q9NWW6 199 aa12.52□□□□□ -0.41
HDAC6-206ENST00000426196 CPSF2Q9P2I0 782 aaKnown RBP12.52□□□□□ -0.41
HDAC6-206ENST00000426196 A0A0A6YYJ9 748 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 IGHV4-61A0A0C4DH41 118 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 A0A1W2PRB8 838 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 SLCO1B7G3V0H7 640 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 SEC31AO94979 1220 aaKnown RBP12.51□□□□□ -0.41
HDAC6-206ENST00000426196 IL3P08700 152 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 PSMA4P25789 261 aaKnown RBP12.51□□□□□ -0.41
HDAC6-206ENST00000426196 SSTR1P30872 391 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 MPIP34949 423 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 OR3A2P47893 321 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 COMPP49747 757 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-206ENST00000426196 SPOCK1Q08629 439 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 CARTPTQ16568 116 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 PLPPR5Q32ZL2 321 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 GRAMD1BQ3KR37 738 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 GRTP1Q5TC63 336 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 B3GLCTQ6Y288 498 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 TRABD2AQ86V40 505 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 CTAGE3PQ8IX95 158 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 LILRA2Q8N149 483 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 BBS4Q96RK4 519 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 NPAS1Q99742 590 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 TRMOQ9BU70 441 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 BHLHE41Q9C0J9 482 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-206ENST00000426196 OCEL1Q9H607 264 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 BRF2Q9HAW0 419 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 C3orf14Q9HBI5 128 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 SLC35C2Q9NQQ7 365 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 MED17Q9NVC6 651 aa12.51□□□□□ -0.41
HDAC6-206ENST00000426196 A0A087WV62 115 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 OR5H1A6NKK0 313 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 FAM159BA6NKW6 160 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 PGM3O95394 542 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 CREB1P16220 341 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 ZNF23P17027 643 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 CD40P25942 277 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 CDC25BP30305 580 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 ZNF83P51522 516 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 TRAF3Q13114 568 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 GGTA1PQ4G0N0 100 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 KLC3Q6P597 504 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 APOOLQ6UXV4 268 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 CENPLQ8N0S6 344 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-206ENST00000426196 ZNF540Q8NDQ6 660 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 ACTRT2Q8TDY3 377 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 SELENOMQ8WWX9 145 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 OSBPL9Q96SU4 736 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 INPP5KQ9BT40 448 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 SRXN1Q9BYN0 137 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-206ENST00000426196 FARSBQ9NSD9 589 aaKnown RBP12.5□□□□□ -0.41
HDAC6-206ENST00000426196 KLHL9Q9P2J3 617 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 PRSS50Q9UI38 385 aa12.5□□□□□ -0.41
HDAC6-206ENST00000426196 TMEFF2Q9UIK5 374 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-206ENST00000426196 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
HDAC6-206ENST00000426196 LOC390937A0A1W2PQ73 354 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 TCRBV9S1A1TA0A576 114 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 GJE1A6NN92 205 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 ALG1L2C9J202 215 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 SLITRK5O94991 958 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 VENTXO95231 258 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 KCNH1O95259 989 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 PDYNP01213 254 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 COX5AP20674 150 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 IGHV1-2P23083 117 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 EIF1P41567 113 aaKnown RBP12.49□□□□□ -0.41
HDAC6-206ENST00000426196 MANFP55145 182 aaKnown RBP12.49□□□□□ -0.41
HDAC6-206ENST00000426196 SLC18A2Q05940 514 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 ARL13AQ5H913 290 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-206ENST00000426196 FAM110BQ8TC76 370 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 GCDHQ92947 438 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-206ENST00000426196 SHCBP1LQ9BZQ2 653 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 MYNNQ9NPC7 610 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 DDX18Q9NVP1 670 aaKnown RBP12.49□□□□□ -0.41
HDAC6-206ENST00000426196 MCM8Q9UJA3 840 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 NFU1Q9UMS0 254 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 SNX6Q9UNH7 406 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 ATP23Q9Y6H3 246 aa12.49□□□□□ -0.41
HDAC6-206ENST00000426196 GNG14A0A1W2PPG7 69 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 SMAD9O15198 467 aaKnown RBP12.48□□□□□ -0.41
HDAC6-206ENST00000426196 ELK4P28324 431 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 SHC1P29353 583 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-206ENST00000426196 DR1Q01658 176 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 CHRNEQ04844 493 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 TMEM107Q6UX40 140 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 CYS1Q717R9 158 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 PTGR2Q8N8N7 351 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-206ENST00000426196 GATSQ8NAP1 163 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms