RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NET1Q7Z628 596 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-209ENST00000425836 SERPINA11Q86U17 422 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 METTL25Q8N6Q8 603 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 GALNT11Q8NCW6 608 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 NFKBIDQ8NI38 313 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 SUCOQ9UBS9 1254 aaKnown RBP22.28■■□□□ 1.16
VEGFA-209ENST00000425836 LIPGQ9Y5X9 500 aa22.28■■□□□ 1.16
VEGFA-209ENST00000425836 C5orf58C9J3I9 102 aa22.27■■□□□ 1.16
VEGFA-209ENST00000425836 RPS4Y1P22090 263 aaKnown RBP22.27■■□□□ 1.16
VEGFA-209ENST00000425836 HSF1Q00613 529 aa22.27■■□□□ 1.16
VEGFA-209ENST00000425836 TOMM20Q15388 145 aa22.27■■□□□ 1.16
VEGFA-209ENST00000425836 ZNF630Q2M218 657 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-209ENST00000425836 GFRALQ6UXV0 394 aa22.27■■□□□ 1.16
VEGFA-209ENST00000425836 GHDCQ8N2G8 530 aa22.27■■□□□ 1.16
VEGFA-209ENST00000425836 SH3YL1Q96HL8 342 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-209ENST00000425836 HOPXQ9BPY8 73 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-209ENST00000425836 ECSITQ9BQ95 431 aa22.27■■□□□ 1.16
VEGFA-209ENST00000425836 OIP5O43482 229 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 PGM3O95394 542 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 PLA2G2AP14555 144 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 ADH7P40394 386 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 ZNF117Q03924 483 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 SCARB2Q14108 478 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 FGFBP1Q14512 234 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 REEP3Q6NUK4 255 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 TRILQ7L0X0 811 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 CALHM3Q86XJ0 350 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 CHERPQ8IWX8 916 aaKnown RBP22.26■■□□□ 1.15
VEGFA-209ENST00000425836 BBS10Q8TAM1 723 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 CMTM6Q9NX76 183 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 CARD8Q9Y2G2 431 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 L3MBTL1Q9Y468 752 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 NINQ8N4C6 2090 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 ZNF462Q96JM2 2506 aa22.26■■□□□ 1.15
VEGFA-209ENST00000425836 ANKUB1A6NFN9 424 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 GTPBP1O00178 669 aaKnown RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 HCRTR2O43614 444 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 GMFGO60234 142 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 ENDOUP21128 410 aaKnown RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 MSX1P28360 303 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 SRD5A2P31213 254 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 RBBP4Q09028 425 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 MRPL49Q13405 166 aaKnown RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 NDUFAF6Q330K2 333 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 EIPR1Q53HC9 387 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 CBLN3Q6UW01 205 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 YRDCQ86U90 279 aaKnown RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 PEX5LQ8IYB4 626 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 ZZZ3Q8IYH5 903 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 C11orf65Q8NCR3 313 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 FAM83FQ8NEG4 500 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 B4GALNT2Q8NHY0 566 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 OR2B2Q9GZK3 357 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 SLC6A15Q9H2J7 730 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 PIF1Q9H611 641 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 PTGES2Q9H7Z7 377 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 C15orf38-AP3S2A0A0A6YYH1 394 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 A0A1B0GTH9 108 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 A0A1B0GVC2 190 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 CLDN24A6NM45 220 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 ZNHIT1O43257 154 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 HCN1O60741 890 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 DBIP07108 87 aaKnown RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 DPP4P27487 766 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 DSCR4P56555 118 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 KCNJ10P78508 379 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 WIPI1Q5MNZ9 446 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 EIF3MQ7L2H7 374 aaKnown RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 FGD2Q7Z6J4 655 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 ARPINQ7Z6K5 226 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 ATCAYQ86WG3 371 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 SPPL2CQ8IUH8 684 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 SLC15A3Q8IY34 581 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 OR52P1PQ8NH57 321 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 C1GALT1C1Q96EU7 318 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 ZNF583Q96ND8 569 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 KLHDC3Q9BQ90 382 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 LDAHQ9H6V9 325 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 DKKL1Q9UK85 242 aa22.25■■□□□ 1.15
VEGFA-209ENST00000425836 MRPS18CQ9Y3D5 142 aaKnown RBP22.25■■□□□ 1.15
VEGFA-209ENST00000425836 TRGV5A0A0B4J1U4 118 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 PYCARD-AS1I3L0S3 204 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 ZNF264O43296 627 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 SUSD5O60279 629 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 ZIC3O60481 467 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 BCAS1O75363 584 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-209ENST00000425836 CSTAP01040 98 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 UBL4AP11441 157 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 IL7RP16871 459 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 PGM1P36871 562 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 VRK2Q86Y07 508 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 HIPK4Q8NE63 616 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 DTNBP1Q96EV8 351 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 SPATA9Q9BWV2 254 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 TAS2R10Q9NYW0 307 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 ICAM5Q9UMF0 924 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 SLC35A3Q9Y2D2 325 aa22.24■■□□□ 1.15
VEGFA-209ENST00000425836 SHANK1Q9Y566 2161 aa22.23■■□□□ 1.15
VEGFA-209ENST00000425836 EIF4E2O60573 245 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms