RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DOLPP1Q86YN1 238 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 CHERPQ8IWX8 916 aaKnown RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 MSRB3Q8IXL7 192 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 FAM26EQ8N5C1 309 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 TMCO5AQ8N6Q1 288 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 ABTB1Q969K4 478 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 SFXN2Q96NB2 322 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 OR2B2Q9GZK3 357 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 MTHFD2LQ9H903 347 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 CACYBPQ9HB71 228 aaKnown RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 CALML5Q9NZT1 146 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 SUCOQ9UBS9 1254 aaKnown RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 CARD8Q9Y2G2 431 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 POLEQ07864 2286 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 PRAMEF27A3QJZ7 478 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 SERINC4A6NH21 518 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 C5orf58C9J3I9 102 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 ADAM10O14672 748 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 MRASO14807 208 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 KIAA0513O60268 411 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 ZIC3O60481 467 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 TNFRSF21O75509 655 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 UGT2B17O75795 530 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 ZIC2O95409 532 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF41P51814 821 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-202ENST00000421712 CRISP3P54108 245 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 PER3P56645 1201 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF141Q15928 474 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 RUNDC3AQ59EK9 446 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 GCNT6Q5T4J0 391 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 FRRS1Q6ZNA5 592 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 EID3Q8N140 333 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 DPP10Q8N608 796 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 PCYOX1LQ8NBM8 494 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 C1GALT1C1Q96EU7 318 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 CGREF1Q99674 301 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 QRSL1Q9H0R6 528 aaKnown RBP14.31□□□□□ -0.12
BRAT1-202ENST00000421712 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-202ENST00000421712 PNPLA3Q9NST1 481 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 ERRFI1Q9UJM3 462 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-202ENST00000421712 CAMK2AQ9UQM7 478 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 VDAC3Q9Y277 283 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 MRPS18CQ9Y3D5 142 aaKnown RBP14.31□□□□□ -0.12
BRAT1-202ENST00000421712 PCNX3Q9H6A9 2034 aa14.31□□□□□ -0.12
BRAT1-202ENST00000421712 IGLV3-32A0A0A0MS00 114 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 BBIP1A8MTZ0 92 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 B4DXG7 233 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 NPIPB9F8W1W9 429 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 FBP2O00757 339 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 SLC22A2O15244 555 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF264O43296 627 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 ACTL6AO96019 429 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 CSTAP01040 98 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 GUSBP08236 651 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 NUDT7P0C024 238 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 UBL4AP11441 157 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 HOXB9P17482 250 aaPredicted RBP14.3□□□□□ -0.12
BRAT1-202ENST00000421712 BMP7P18075 431 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 CCR4P51679 360 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 CAPRIN1Q14444 709 aaKnown RBP14.3□□□□□ -0.12
BRAT1-202ENST00000421712 NDUFAF6Q330K2 333 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 REP15Q6BDI9 236 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 ENPP6Q6UWR7 440 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 ARSKQ6UWY0 536 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 EIF3MQ7L2H7 374 aaKnown RBP14.3□□□□□ -0.12
BRAT1-202ENST00000421712 PEX5LQ8IYB4 626 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 POU5F2Q8N7G0 328 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 OR5M1Q8NGP8 315 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 SLC38A5Q8WUX1 472 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 MAL2Q969L2 176 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 RELTQ969Z4 430 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 ZG16BQ96DA0 208 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 ANKRD27Q96NW4 1050 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 TIMP4Q99727 224 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 CPPED1Q9BRF8 314 aaPredicted RBP14.3□□□□□ -0.12
BRAT1-202ENST00000421712 SAP130Q9H0E3 1048 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 SLC38A1Q9H2H9 487 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 TP63Q9H3D4 680 aaPredicted RBP14.3□□□□□ -0.12
BRAT1-202ENST00000421712 GID8Q9NWU2 228 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 KCNE5Q9UJ90 142 aa14.3□□□□□ -0.12
BRAT1-202ENST00000421712 TRBV5-3A0A0A0MS03 114 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 CENPVL1A0A0U1RR11 272 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 FIGNL2A6NMB9 653 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 TFPTP0C1Z6 253 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 UBTFL6P0CB48 400 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-202ENST00000421712 IL7RP16871 459 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 P2RX1P51575 399 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 MTPNP58546 118 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 KCNJ10P78508 379 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF117Q03924 483 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 SRYQ05066 204 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 CRYZQ08257 329 aaKnown RBP14.29□□□□□ -0.12
BRAT1-202ENST00000421712 MAPK14Q16539 360 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-202ENST00000421712 PM20D2Q8IYS1 436 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 TOR1AIP2Q8NFQ8 470 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 RP9Q8TA86 221 aaKnown RBP14.29□□□□□ -0.12
BRAT1-202ENST00000421712 LRRC58Q96CX6 371 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 TMEM19Q96HH6 336 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 PIGQQ9BRB3 760 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms