RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 OCRLQ01968 901 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 FAM27E3Q08E93 113 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 PON3Q15166 354 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 PLPPR5Q32ZL2 321 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.92□□□□□ -0.82
SSBP3-206ENST00000420121 OR2A2Q6IF42 318 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 CDC73Q6P1J9 531 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 PAMR1Q6UXH9 720 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 CAMKMTQ7Z624 323 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 GTPBP8Q8N3Z3 284 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF781Q8N8C0 355 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 COX18Q8N8Q8 333 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 FNDC5Q8NAU1 212 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 OR5P2Q8WZ92 322 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF524Q96C55 264 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 SORT1Q99523 831 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 BTBD2Q9BX70 525 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 PARD6BQ9BYG5 372 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 PIGUQ9H490 435 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 SERHL2Q9H4I8 314 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 UBQLN4Q9NRR5 601 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 GIN1Q9NXP7 522 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 ASIC5Q9NY37 505 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 RAB21Q9UL25 225 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 VDAC3Q9Y277 283 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 PLEKHA6Q9Y2H5 1048 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 TESMINQ9Y4I5 508 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 AP4B1Q9Y6B7 739 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 NPIPA5A0A0B4J1W7 369 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 SH3D21A4FU49 640 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 NPIPA7E9PJI5 369 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 CTIFO43310 598 aaKnown RBP9.91□□□□□ -0.82
SSBP3-206ENST00000420121 EFNA2O43921 213 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 SCN2BO60939 215 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 GOSR1O95249 250 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 LINGO3P0C6S8 592 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 NPIPA8P0DM63 369 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 IL11P20809 199 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 CPA2P48052 419 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 CCT3P49368 545 aaKnown RBP9.91□□□□□ -0.82
SSBP3-206ENST00000420121 PRIM2P49643 509 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 CLDN8P56748 225 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 EEF1A1P68104 462 aaKnown RBP9.91□□□□□ -0.82
SSBP3-206ENST00000420121 HBA1P69905 142 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF117Q03924 483 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 EMX2Q04743 252 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 KRT71Q3SY84 523 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 CPTPQ5TA50 214 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 EEF1A1P5Q5VTE0 462 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 CBLN3Q6UW01 205 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 P4HA3Q7Z4N8 544 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 NUDCD3Q8IVD9 361 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 SFXN5Q8TD22 340 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 ACTRT2Q8TDY3 377 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 SMPDL3BQ92485 455 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 JADE3Q92613 823 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 TUBGCP3Q96CW5 907 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 PGM2Q96G03 612 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 SH3YL1Q96HL8 342 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-206ENST00000420121 DACH2Q96NX9 599 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 ACTRT3Q9BYD9 372 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 BHLHE41Q9C0J9 482 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-206ENST00000420121 OPN3Q9H1Y3 402 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-206ENST00000420121 SSU72Q9NP77 194 aaKnown RBP9.91□□□□□ -0.82
SSBP3-206ENST00000420121 MED17Q9NVC6 651 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 HAO1Q9UJM8 370 aa9.91□□□□□ -0.82
SSBP3-206ENST00000420121 A0A087WZY1 265 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 A0A0J9YW62 118 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 WDR91A4D1P6 747 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 DEFB108AA8MXU0 73 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ANKRD28O15084 1053 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ADAMDEC1O15204 470 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 BIRC5O15392 142 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ATE1O95260 518 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 SERPINE1P05121 402 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 CD8BP10966 210 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 PRPS1L1P21108 318 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 SHC1P29353 583 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 CPOXP36551 454 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 CD79BP40259 229 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 RNF144AP50876 292 aaPredicted RBP9.9□□□□□ -0.82
SSBP3-206ENST00000420121 EEFSECP57772 596 aaKnown RBP9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ABCE1P61221 599 aaKnown RBP9.9□□□□□ -0.82
SSBP3-206ENST00000420121 SIRPAP78324 504 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 PHC1P78364 1004 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 TP53BP2Q13625 1128 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 POU4F3Q15319 338 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 CHI3L2Q15782 390 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 PDCD2Q16342 344 aaPredicted RBP9.9□□□□□ -0.82
SSBP3-206ENST00000420121 SMU1Q2TAY7 513 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 KLHL26Q53HC5 615 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 DCST2Q5T1A1 773 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 CHMP1BQ7LBR1 199 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 MISPQ8IVT2 679 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 CLECL1Q8IZS7 167 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 NATD1Q8N6N6 113 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 CNEP1R1Q8N9A8 125 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 OR56A1Q8NGH5 318 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 OR10D3Q8NH80 312 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms