RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 NDUFS4O43181 175 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 PRICKLE3O43900 615 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 TSC22D2O75157 780 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 SMIM11AP58511 58 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 TAS2R50P59544 299 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 HHEXQ03014 270 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 MXD1Q05195 221 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 DMWDQ09019 674 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 KIR2DS3Q14952 304 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 HEPACAMQ14CZ8 416 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 PLA1AQ53H76 456 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 GCNT6Q5T4J0 391 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 C22orf42Q6IC83 251 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ARMC6Q6NXE6 501 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 TSSK4Q6SA08 328 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 IKBIPQ70UQ0 350 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 BMP8AQ7Z5Y6 402 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 IQCHQ86VS3 1027 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ZNF761Q86XN6 746 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 GKN2Q86XP6 184 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 SFTPA2Q8IWL1 248 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 TAGAPQ8N103 731 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 LINC00471Q8N535 108 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 PHF21AQ96BD5 680 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 PELOQ9BRX2 385 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 MS4A8Q9BY19 250 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 POLDIP3Q9BY77 421 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ACTR6Q9GZN1 396 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 GHITMQ9H3K2 345 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 FGF20Q9NP95 211 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ZNF451Q9Y4E5 1061 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 A0A1W2PR77 199 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 K7ESF4 209 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ITGA10O75578 1167 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 GCM2O75603 506 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ZNF250P15622 560 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 RPL3P39023 403 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 BCL6P41182 706 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 CCT3P49368 545 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ZXDAP98168 799 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 NDUFA9Q16795 377 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 TRIM40Q6P9F5 258 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 RTL4Q6ZR62 310 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 NAGSQ8N159 534 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 SRFBP1Q8NEF9 429 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 OR52N2Q8NGI0 321 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 C16orf78Q8WTQ4 265 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ZFPM2Q8WW38 1151 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 RGMAQ96B86 450 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 KCTD12Q96CX2 325 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 NXPE2Q96DL1 559 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 C11orf24Q96F05 449 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 DPYSL5Q9BPU6 564 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 DPH2Q9BQC3 489 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 C7orf50Q9BRJ6 194 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 TSSK6Q9BXA6 273 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 MIEF1Q9NQG6 463 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 ACTR10Q9NZ32 417 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 CLEC2DQ9UHP7 191 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 SCP2D1Q9UJQ7 156 aa13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 EXOSC1Q9Y3B2 195 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 SF3B6Q9Y3B4 125 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-204ENST00000420101 A0A0A6YYJ9 748 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 A0A0G2JN53 185 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 GABRR3A8MPY1 467 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 PLPP1O14494 284 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 PLOD3O60568 738 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 CLEC3AO75596 197 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 B3GALT4O96024 378 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 LALBAP00709 142 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 LAMP1P11279 417 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 CSNK1EP49674 416 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 S100A12P80511 92 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 RAB40BQ12829 278 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 COX10Q12887 443 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 EXOSC2Q13868 293 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 FCN2Q15485 313 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 ZNF57Q68EA5 555 aaPredicted RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 OVCH2Q7RTZ1 564 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 FGD2Q7Z6J4 655 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 OR9Q2Q8NGE9 314 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 LILRB1Q8NHL6 650 aaPredicted RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 PTP4A1Q93096 173 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 PPCDCQ96CD2 204 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 ERMAPQ96PL5 475 aaPredicted RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 ATF6BQ99941 703 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 IER2Q9BTL4 223 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 BHLHE41Q9C0J9 482 aaPredicted RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 DPAGT1Q9H3H5 408 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 REEP4Q9H6H4 257 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 NMNAT1Q9HAN9 279 aaPredicted RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 HRASLS2Q9NWW9 162 aa13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 TESQ9UGI8 421 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-204ENST00000420101 hCG_1807616A0A1W2PRN6 198 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 C2orf74A8MZ97 194 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 FAAHO00519 579 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 TSPAN4O14817 238 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SLC28A2O43868 658 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms