RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CROCCP2Q86T23 111 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 SLC22A16Q86VW1 577 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 DDIASQ8IXT1 998 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PRR22Q8IZ63 422 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 CLYBLQ8N0X4 340 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 FAM109AQ8N4B1 249 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 TMEM251Q8N6I4 163 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 OR7G2Q8NG99 324 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 OR6Y1Q8NGX8 325 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 FAM57AQ8TBR7 257 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 KAT2AQ92830 837 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ARL8AQ96BM9 186 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ERP27Q96DN0 273 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PGM2Q96G03 612 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PKNOX2Q96KN3 472 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 EGLN2Q96KS0 407 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 BBS4Q96RK4 519 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 DOHHQ9BU89 302 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 DEFB127Q9H1M4 99 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF703Q9H7S9 590 aaPredicted RBP6.33□□□□□ -1.4
HMGN1-205ENST00000419378 ZDHHC11Q9H8X9 412 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PROK2Q9HC23 129 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 TAS2R7Q9NYW3 318 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PRODH2Q9UF12 536 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 GIMAP2Q9UG22 337 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 BOKQ9UMX3 212 aaPredicted RBP6.33□□□□□ -1.4
HMGN1-205ENST00000419378 TMED5Q9Y3A6 229 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 LIPGQ9Y5X9 500 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.33□□□□□ -1.4
HMGN1-205ENST00000419378 CELSR2Q9HCU4 2923 aa6.33□□□□□ -1.4
HMGN1-205ENST00000419378 PCNX1Q96RV3 2341 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ATP6AP2A0A1C7CYW4 349 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 WDR91A4D1P6 747 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 FRG2CA6NGY1 282 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 CAPN14A8MX76 684 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 H3BUI4 141 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 PRRG2O14669 202 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 TP53I11O14683 189 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 TO15178 435 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 TM9SF1O15321 606 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 PLOD3O60568 738 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 NME6O75414 186 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ERLIN1O75477 346 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 SKAP2O75563 359 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ATP6AP2O75787 350 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 BCAS2O75934 225 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 PDE9AO76083 593 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 IGHG3P01860 377 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 TPOP07202 933 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 MYZAPP0CAP1 466 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 DHRS4L1P0CG22 281 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 RAP2AP10114 183 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 NAGAP17050 411 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 MALP21145 153 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 DRD5P21918 477 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 NTSP30990 170 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 MPIP34949 423 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 PTGS2P35354 604 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 MAGEA5P43359 124 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 PPICP45877 212 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 AGFG1P52594 562 aaKnown RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 CTXN1P60606 82 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 DCAF7P61962 342 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 RPP38P78345 283 aaKnown RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ADORA2A-AS1P86434 159 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 PDE7AQ13946 482 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 GALNTL6Q49A17 601 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 RFTN2Q52LD8 501 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ANKRD26P1Q6NSI1 321 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 MTFR2Q6P444 385 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 TMEM107Q6UX40 140 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 LRIG3Q6UXM1 1119 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 LCNL1Q6ZST4 164 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 NCCRP1Q6ZVX7 275 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 TRILQ7L0X0 811 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 DOLPP1Q86YN1 238 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 NUDCD3Q8IVD9 361 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 SLC34A3Q8N130 599 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 CLHC1Q8NHS4 586 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 SPPL2AQ8TCT8 520 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ITLN2Q8WWU7 325 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 HGDQ93099 445 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 OMA1Q96E52 524 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF764Q96H86 408 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF597Q96LX8 424 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 VSTM2LQ96N03 204 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 RILPQ96NA2 401 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 AMDHD1Q96NU7 426 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 GNRHR2Q96P88 292 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 TSSK3Q96PN8 268 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 BTBD9Q96Q07 612 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 SECISBP2Q96T21 854 aaKnown RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 STMN4Q9H169 189 aaPredicted RBP6.32□□□□□ -1.4
HMGN1-205ENST00000419378 FOLH1BQ9HBA9 442 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 ZDHHC2Q9UIJ5 367 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 MEMO1Q9Y316 297 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 GTF3C1Q12789 2109 aa6.32□□□□□ -1.4
HMGN1-205ENST00000419378 NCOA6Q14686 2063 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms