RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CLCA1A8K7I4 914 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 FAM47E-STBD1D6RA91 191 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 NDUFB5O43674 189 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 FCMRO60667 390 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 KRT16P08779 473 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 COX6B1P14854 86 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 MATN1P21941 496 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 MRPL19P49406 292 aaKnown RBP18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 CLK3P49761 638 aaKnown RBP18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 CASP9P55211 416 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 ZNF117Q03924 483 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 SRYQ05066 204 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 FOXF2Q12947 444 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 SLC25A35Q3KQZ1 300 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 ENPP6Q6UWR7 440 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 ZNF350Q9GZX5 532 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 OR51I1Q9H343 314 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 KCNJ16Q9NPI9 418 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 ICAM5Q9UMF0 924 aa18.61■□□□□ 0.57
PKNOX1-202ENST00000418336 H0Y3Z8 333 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 SOX30O94993 753 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 CPSF4O95639 269 aaKnown RBP18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 TGM6O95932 706 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 PGRP06401 933 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 ATP12AP54707 1039 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 CLDN20P56880 219 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 PLAURQ03405 335 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 PLPPR5Q32ZL2 321 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 ARHGAP11BQ3KRB8 267 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 FBXL19-AS1Q494R0 122 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 BHLHB9Q6PI77 547 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 CBLN3Q6UW01 205 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 GGNQ86UU5 652 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 DMRTC2Q8IXT2 367 aaPredicted RBP18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 SLC35G5Q96KT7 338 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 PTGES2Q9H7Z7 377 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 ZNF446Q9NWS9 450 aa18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 ZNF629Q9UEG4 869 aaPredicted RBP18.6■□□□□ 0.57
PKNOX1-202ENST00000418336 HMGB1P1B2RPK0 211 aaPredicted RBP18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 GMFGO60234 142 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 DNAJA2O60884 412 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 RCBTB2O95199 551 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 GUSBP08236 651 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 LINGO3P0C6S8 592 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 IDO1P14902 403 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 ZNF17P17021 662 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 S100A3P33764 101 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 RNF144AP50876 292 aaPredicted RBP18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 MVDP53602 400 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 CTU2Q2VPK5 515 aaKnown RBP18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 RAET1LQ5VY80 246 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 MEX3BQ6ZN04 569 aaKnown RBP18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 MTERF4Q7Z6M4 381 aaKnown RBP18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 MISPQ8IVT2 679 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 GTPBP8Q8N3Z3 284 aaPredicted RBP18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 OR9I1Q8NGQ6 314 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 WNT2BQ93097 391 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 DTNBP1Q96EV8 351 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 ADGRG7Q96K78 797 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 EBF4Q9BQW3 602 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 PIGQQ9BRB3 760 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 NMUR2Q9GZQ4 415 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 SAP130Q9H0E3 1048 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 MED17Q9NVC6 651 aa18.59■□□□□ 0.57
PKNOX1-202ENST00000418336 TACC2O95359 2948 aa18.58■□□□□ 0.57
PKNOX1-202ENST00000418336 ETV2O00321 342 aaPredicted RBP18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 SYT5O00445 386 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 SCDO00767 359 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 EFNA2O43921 213 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 TNFRSF21O75509 655 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 UGT2B17O75795 530 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 PEPDP12955 493 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 NID1P14543 1247 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 HOXB9P17482 250 aaPredicted RBP18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 IL11P20809 199 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 BMP5P22003 454 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 GCKP35557 465 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 PPP2R2AP63151 447 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 SF3B4Q15427 424 aaKnown RBP eCLIP18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 MAPK11Q15759 364 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 ZNF141Q15928 474 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 MAPK14Q16539 360 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 GSTA3Q16772 222 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 NDUFAF6Q330K2 333 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 FLYWCH1Q4VC44 716 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 METTL25Q8N6Q8 603 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 GLB1L3Q8NCI6 653 aaPredicted RBP18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 VPS37AQ8NEZ2 397 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 RAB8BQ92930 207 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 C14orf79Q96F83 325 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 HOXD1Q9GZZ0 328 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 ZIM2Q9NZV7 527 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 VDAC3Q9Y277 283 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 DTNAQ9Y4J8 743 aa18.58■□□□□ 0.56
PKNOX1-202ENST00000418336 HEATR5AQ86XA9 2040 aa18.57■□□□□ 0.56
PKNOX1-202ENST00000418336 A0A087WZY1 265 aa18.57■□□□□ 0.56
PKNOX1-202ENST00000418336 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.57■□□□□ 0.56
PKNOX1-202ENST00000418336 DUXAA6NLW8 204 aa18.57■□□□□ 0.56
PKNOX1-202ENST00000418336 LINC01387J3KSC0 135 aa18.57■□□□□ 0.56
PKNOX1-202ENST00000418336 HMGN4O00479 90 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms