RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 OR3A3P47888 321 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 PCBP3P57721 371 aaKnown RBP12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 RHAGQ02094 409 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 TRAM2Q15035 370 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 MPP7Q5T2T1 576 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 FRRS1Q6ZNA5 592 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 LUZP2Q86TE4 346 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR8S1Q8NH09 359 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR2L2Q8NH16 312 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 TSSK2Q96PF2 358 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 CCDC3Q9BQI4 270 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 THAP7Q9BT49 309 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR52D1Q9H346 318 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 IKZF2Q9UKS7 526 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 TBX6O95947 436 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 IFNGR2P38484 337 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 EEF1A2Q05639 463 aaKnown RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 STX4Q12846 297 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SLC25A25Q6KCM7 469 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 XKRXQ6PP77 449 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 CDK20Q8IZL9 346 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 CEP76Q8TAP6 659 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 NKD1Q969G9 470 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 FKRPQ9H9S5 495 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SRA1Q9HD15 236 aaKnown RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 ING1Q9UK53 422 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 UNC13CQ8NB66 2214 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 FMO6PO60774 539 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 HLA-DQA2P01906 255 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 EIF4EP06730 217 aaKnown RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 HIST1H1TP22492 207 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 MAOBP27338 520 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 TEAD1P28347 426 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 EPHA5P54756 1037 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 POU6F2P78424 691 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 CRYZQ08257 329 aaKnown RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 TMEM64Q6YI46 380 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 UBE3DQ7Z6J8 389 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 TOMM5Q8N4H5 51 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 RFLNBQ8N5W9 214 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 TRMT10AQ8TBZ6 339 aaKnown RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 FANK1Q8TC84 345 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SIPA1Q96FS4 1042 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SENP5Q96HI0 755 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 ERMAPQ96PL5 475 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 DHRS9Q9BPW9 319 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SPATA5L1Q9BVQ7 753 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 SRMSQ9H3Y6 488 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 STOML2Q9UJZ1 356 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 ARHGEF17Q96PE2 2063 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 KNTC1P50748 2209 aa12.32□□□□□ -0.44
TNFRSF8-203ENST00000417814 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 POM121BA6NF01 834 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 C1QTNF3-AMACRE9PGA6 284 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SIGLEC5O15389 551 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 NAT2P11245 290 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 ANXA11P50995 505 aaKnown RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SHC2P98077 582 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SIGLEC14Q08ET2 396 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 FAPQ12884 760 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 ZNF155Q12901 538 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 CRMP1Q14194 572 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 MZT2AQ6P582 158 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 ZNF613Q6PF04 617 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 ACBD7Q8N6N7 88 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 GALNT6Q8NCL4 622 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 DNAAF1Q8NEP3 725 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 C17orf47Q8NEP4 570 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR2T33Q8NG76 320 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR4C6Q8NH72 309 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 TMEM163Q8TC26 289 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SLC35A4Q96G79 324 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 CACNG6Q9BXT2 260 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SYNPO2LQ9H987 977 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 NDUFB11Q9NX14 153 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 ATXN7L1Q9ULK2 861 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 ADAM18Q9Y3Q7 739 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 FOXE1O00358 373 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 KHNYNO15037 678 aaKnown RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 KHDRBS3O75525 346 aaKnown RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SIX6O95475 246 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 EML2O95834 649 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SRPRAP08240 638 aaKnown RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 POU3F3P20264 500 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 PPM1AP35813 382 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 IRF5Q13568 498 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 ELAVL3Q14576 367 aaKnown RBP12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 PLK5Q496M5 336 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 CDKL4Q5MAI5 379 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 C11orf88Q6PI97 169 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 KANSL1Q7Z3B3 1105 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 FGD2Q7Z6J4 655 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 FAM109AQ8N4B1 249 aa12.31□□□□□ -0.44
TNFRSF8-203ENST00000417814 SLAIN1Q8ND83 568 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms