RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ERVK-18Q9QC07 812 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 COPS7AQ9UBW8 275 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 AASSQ9UDR5 926 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 MKL2Q9ULH7 1088 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 SLC35A3Q9Y2D2 325 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 PCDHGB2Q9Y5G2 931 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 PCDHGA5Q9Y5G8 931 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 USP34Q70CQ2 3546 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 EFCAB10A6NFE3 127 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 EFCAB7A8K855 629 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 SCRG1O75711 98 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 IL33O95760 270 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 CYC1P08574 325 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 GKN3PP0CG01 181 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 HTR2AP28223 471 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 ADH7P40394 386 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 TMBIM6P55061 237 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 IL11RAQ14626 422 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 NKAIN1Q4KMZ8 207 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 COX15Q7KZN9 410 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 PRICKLE2Q7Z3G6 844 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 BMP8AQ7Z5Y6 402 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 PPP1R3BQ86XI6 285 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 TEX47Q8TBZ9 253 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 RORBQ92753 470 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 OSTF1Q92882 214 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 ISOC1Q96CN7 298 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 MPP4Q96JB8 637 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 TEX12Q9BXU0 123 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 POLDIP3Q9BY77 421 aaKnown RBP15.51■□□□□ 0.07
SSBP3-205ENST00000417664 UBQLN4Q9NRR5 601 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 DNAJB12Q9NXW2 375 aaKnown RBP15.51■□□□□ 0.07
SSBP3-205ENST00000417664 TMEM5Q9Y2B1 443 aa15.51■□□□□ 0.07
SSBP3-205ENST00000417664 ADAMTS9Q9P2N4 1935 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 ZNF99A8MXY4 864 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-205ENST00000417664 D6RAR5 112 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 KLF4O43474 513 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 NOL3O60936 208 aaKnown RBP15.5■□□□□ 0.07
SSBP3-205ENST00000417664 GP1BAP07359 652 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 PRG2P13727 222 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 GRK6P43250 576 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 DCDP81605 110 aaKnown RBP15.5■□□□□ 0.07
SSBP3-205ENST00000417664 MEDAGQ5VYS4 303 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 SLC27A4Q6P1M0 643 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 AHSA2Q719I0 299 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 MRGPREQ86SM8 312 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 NRMQ8IXM6 262 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 NLGN4XQ8N0W4 816 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 ZNF614Q8N883 585 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 ZSCAN1Q8NBB4 408 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 C17orf47Q8NEP4 570 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 OR2I1PQ8NGU4 316 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 WDR36Q8NI36 951 aaKnown RBP15.5■□□□□ 0.07
SSBP3-205ENST00000417664 STT3BQ8TCJ2 826 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 CNOT9Q92600 299 aaKnown RBP15.5■□□□□ 0.07
SSBP3-205ENST00000417664 ADIPOR1Q96A54 375 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 GPA33Q99795 319 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 PRSS27Q9BQR3 290 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 GTPBP2Q9BX10 602 aaKnown RBP15.5■□□□□ 0.07
SSBP3-205ENST00000417664 LHPPQ9H008 270 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 SYNDIG1Q9H7V2 258 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 C11orf16Q9NQ32 467 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 IL20Q9NYY1 176 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 NTNG1Q9Y2I2 539 aa15.5■□□□□ 0.07
SSBP3-205ENST00000417664 SERINC4A6NH21 518 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 TO15178 435 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 CHP2O43745 196 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 MT-ND2P03891 347 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 CDK1P06493 297 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 ZGLP1P0C6A0 271 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 FGF5P12034 268 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 PIPP12273 146 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-205ENST00000417664 CSTF2P33240 577 aaKnown RBP eCLIP15.49■□□□□ 0.07
SSBP3-205ENST00000417664 RBM34P42696 430 aaKnown RBP15.49■□□□□ 0.07
SSBP3-205ENST00000417664 PLAURQ03405 335 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 PIGFQ07326 219 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 GINS1Q14691 196 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 OCLNQ16625 522 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 KLHL26Q53HC5 615 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 PWWP2BQ6NUJ5 590 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 DBX2Q6ZNG2 339 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 ERI1Q8IV48 349 aaKnown RBP15.49■□□□□ 0.07
SSBP3-205ENST00000417664 CDK20Q8IZL9 346 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 FAM26EQ8N5C1 309 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 OR1N1Q8NGS0 311 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 TMEM255BQ8WV15 326 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 FAR1Q8WVX9 515 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 TMEM239Q8WW34 195 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 GGHQ92820 318 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 CLIP3Q96DZ5 547 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 FAM46AQ96IP4 442 aaKnown RBP15.49■□□□□ 0.07
SSBP3-205ENST00000417664 SLC22A11Q9NSA0 550 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 CTSFQ9UBX1 484 aa15.49■□□□□ 0.07
SSBP3-205ENST00000417664 COL5A1P20908 1838 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-205ENST00000417664 A0A0B4J2E0 115 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 C2orf92A0A1B0GVN3 265 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 A0A1B0GX12 115 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 A8MUA0 341 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 KHNYNO15037 678 aaKnown RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 TRMUO75648 421 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms