RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 ANKS4BQ8N8V4 417 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 C7orf57Q8NEG2 295 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 BCAS4Q8TDM0 211 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 KAT2AQ92830 837 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 KLHL29Q96CT2 875 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 ZNF845Q96IR2 970 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-202ENST00000416769 EGLN2Q96KS0 407 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 UCN2Q96RP3 112 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 ADOQ96SZ5 270 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
LINC00339-202ENST00000416769 FAIM2Q9BWQ8 316 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 PIGMQ9H3S5 423 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 MYNNQ9NPC7 610 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 MRGBPQ9NV56 204 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 BAIAP2L1Q9UHR4 511 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 GPR45Q9Y5Y3 372 aa11.63□□□□□ -0.55
LINC00339-202ENST00000416769 C1orf226A1L170 272 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 SHISA8B8ZZ34 492 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ARHGEF9O43307 516 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 REM1O75628 298 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 CBR3O75828 277 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 GOSR1O95249 250 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ATP1B1P05026 303 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 THBDP07204 575 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 NAGAP17050 411 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 NCF2P19878 526 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-202ENST00000416769 CRYGSP22914 178 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 SRD5A2P31213 254 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 UGT2B10P36537 528 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 CD79BP40259 229 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ALDH9A1P49189 494 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 GAS1P54826 345 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 C21orf58P58505 322 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 CAPRIN1Q14444 709 aaKnown RBP11.62□□□□□ -0.55
LINC00339-202ENST00000416769 PRSS53Q2L4Q9 553 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 PDCD4Q53EL6 469 aaKnown RBP11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ZNF628Q5EBL2 1059 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 TMEM81Q6P7N7 255 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ENPP6Q6UWR7 440 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 CXXC5Q7LFL8 322 aaKnown RBP11.62□□□□□ -0.55
LINC00339-202ENST00000416769 LRRC75A-AS1Q8N1F1 130 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 OR9A2Q8NGT5 310 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 EFHD2Q96C19 240 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-202ENST00000416769 MTERF3Q96E29 417 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ZNF681Q96N22 645 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ZFP3Q96NJ6 502 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 COL21A1Q96P44 957 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 TSSK3Q96PN8 268 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 PIP5K1AQ99755 562 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 MED18Q9BUE0 208 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 DPY30Q9C005 99 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 TMEM45AQ9NWC5 275 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 NDRG3Q9UGV2 375 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 DKKL1Q9UK85 242 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 GPR55Q9Y2T6 319 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-202ENST00000416769 ARL2BPQ9Y2Y0 163 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 CR1P17927 2039 aa11.62□□□□□ -0.55
LINC00339-202ENST00000416769 CHD3Q12873 2000 aaKnown RBP11.62□□□□□ -0.55
LINC00339-202ENST00000416769 FRG2CA6NGY1 282 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 SLC22A20A6NK97 555 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 MSTNO14793 375 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 ANKRD28O15084 1053 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 TO15178 435 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 SEC14L5O43304 696 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 SCO2O43819 266 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 TSPAN2O60636 221 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 TBX19O60806 448 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CCDC22O60826 627 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CNOT4O95628 575 aaKnown RBP11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CGAP01215 116 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 IL3P08700 152 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CT45A8P0DMV1 189 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CT45A9P0DMV2 189 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 DDCP20711 480 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 PRPS1L1P21108 318 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 RPL3P39023 403 aaKnown RBP11.61□□□□□ -0.55
LINC00339-202ENST00000416769 MC3RP41968 323 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 PTH2RP49190 550 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CBX1P83916 185 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 STX5Q13190 355 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CT45A2Q5DJT8 189 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 C6orf163Q5TEZ5 329 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 P4HA3Q7Z4N8 544 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 R3HCC1LQ7Z5L2 792 aaKnown RBP11.61□□□□□ -0.55
LINC00339-202ENST00000416769 ZNF610Q8N9Z0 462 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 FNDC9Q8TBE3 224 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 PINK1Q9BXM7 581 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 REEP4Q9H6H4 257 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 SDR39U1Q9NRG7 319 aaPredicted RBP11.61□□□□□ -0.55
LINC00339-202ENST00000416769 TAS2R7Q9NYW3 318 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 ZIM2Q9NZV7 527 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 PSME2Q9UL46 239 aa11.61□□□□□ -0.55
LINC00339-202ENST00000416769 CADP27708 2225 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 NDUFAB1O14561 156 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 GMFGO60234 142 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 SLC22A3O75751 556 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms