RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-208	ENST00000416108	RAPSN	Q13702	412 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	MAPK14	Q16539	360 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	NRF1	Q16656	503 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	GLIPR1L2	Q4G1C9	344 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	KLHL26	Q53HC5	615 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	SLC30A6	Q6NXT4	461 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	LYPD8	Q6UX82	237 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	UNQ6494/PRO21346	Q6UXR6	183 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	LINC00696	Q6ZRV3	163 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	PLEKHM3	Q6ZWE6	761 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	ERMP1	Q7Z2K6	904 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	APLF	Q8IW19	511 aa	Predicted RBP	7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	ARMC10	Q8N2F6	343 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	FAM86B1	Q8N7N1	296 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	POGLUT1	Q8NBL1	392 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	PAPD5	Q8NDF8	572 aa	Known RBP	7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	GPR32P1	Q8NGA4	272 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	OR10G3	Q8NGC4	313 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	OR4C3	Q8NH37	302 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	HGD	Q93099	445 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	SLC35B4	Q969S0	331 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	SDCCAG3	Q96C92	435 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	ZG16B	Q96DA0	208 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	ZNF300	Q96RE9	604 aa	Predicted RBP	7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	NODAL	Q96S42	347 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	SECISBP2	Q96T21	854 aa	Known RBP	7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	MCHR1	Q99705	422 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	BDH2	Q9BUT1	245 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	REEP1	Q9H902	201 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	IL1RAP	Q9NPH3	570 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	TIMMDC1	Q9NPL8	285 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	SACM1L	Q9NTJ5	587 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	FLRT3	Q9NZU0	649 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	SELENON	Q9NZV5	590 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	CNIH4	Q9P003	139 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	PPP4R1L	Q9P1A2	415 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	RPS6KB2	Q9UBS0	482 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	TES	Q9UGI8	421 aa	Known RBP	7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	KCNE5	Q9UJ90	142 aa		7.71	□□□□□ -1.18
RBM39-208	ENST00000416108	CENPVL1	A0A0U1RR11	272 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	TMEM8B	A6NDV4	472 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	CLDN24	A6NM45	220 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ADAMDEC1	O15204	470 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	FRS3	O43559	492 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	HCRTR2	O43614	444 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	FADS1	O60427	444 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	MAN1A2	O60476	641 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	EIF4E2	O60573	245 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ZNF354A	O60765	605 aa	Predicted RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	E2F6	O75461	281 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ATP6V1G2	O95670	118 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	MT-ND1	P03886	318 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ANPEP	P15144	967 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	RHCE	P18577	417 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ADH7	P40394	386 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	SESN3	P58005	492 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	SMIM11A	P58511	58 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ARG2	P78540	354 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	SPIB	Q01892	262 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	CBFB	Q13951	182 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	SNCB	Q16143	134 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ZNF791	Q3KP31	576 aa	Predicted RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	PRAMEF20	Q5VT98	475 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	AP1AR	Q63HQ0	302 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	DESI1	Q6ICB0	168 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	PIWIL3	Q7Z3Z3	882 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	MARCH3	Q86UD3	253 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	GRAMD2A	Q8IUY3	354 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	PQLC1	Q8N2U9	271 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	CLIP4	Q8N3C7	705 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ICA1L	Q8NDH6	482 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	TOR1AIP2	Q8NFQ8	470 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	B4GALNT2	Q8NHY0	566 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ZNF563	Q8TA94	476 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	RNF217	Q8TC41	542 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	GRHL3	Q8TE85	626 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	APOBEC4	Q8WW27	367 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	LRTOMT	Q8WZ04	291 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	PSMF1	Q92530	271 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	TM9SF4	Q92544	642 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	CNOT9	Q92600	299 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	SLCO4A1	Q96BD0	722 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	SH3YL1	Q96HL8	342 aa	Predicted RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	PRRC1	Q96M27	445 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	C5orf34	Q96MH7	638 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	FNDC11	Q9BVV2	318 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	AMBRA1	Q9C0C7	1298 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	POLR2J2	Q9GZM3	115 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	LAT2	Q9GZY6	243 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	POLR2J3	Q9H1A7	115 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	RASSF4	Q9H2L5	321 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	RNPEPL1	Q9HAU8	725 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	TMEM27	Q9HBJ8	222 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	EXOSC3	Q9NQT5	275 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	RLIM	Q9NVW2	624 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	ANKRD10	Q9NXR5	420 aa		7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	DNAJB12	Q9NXW2	375 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-208	ENST00000416108	C6orf203	Q9P0P8	240 aa	Predicted RBP	7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 303 ms