RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CLOCKO15516 846 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 NDUFB5O43674 189 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 EFNA2O43921 213 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 IFNA2P01563 188 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 SNRPAP09012 282 aaKnown RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 LINGO3P0C6S8 592 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 ATP5F1P24539 256 aaPredicted RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 GCAP28676 217 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 ECHS1P30084 290 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 NTSP30990 170 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 SLC18A2Q05940 514 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 BTKQ06187 659 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 CD226Q15762 336 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 GLE1Q53GS7 698 aaKnown RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 SFRP5Q5T4F7 317 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 HBMQ6B0K9 141 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 IKBIPQ70UQ0 350 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 TRIM46Q7Z4K8 759 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 TRABD2AQ86V40 505 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 PIWIL2Q8TC59 973 aaKnown RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 ABHD3Q8WU67 409 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 ROBO4Q8WZ75 1007 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 OSTF1Q92882 214 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 KLHL15Q96M94 604 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 TRAF4Q9BUZ4 470 aaPredicted RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 SRXN1Q9BYN0 137 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 ESRP2Q9H6T0 727 aaKnown RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 TMEM185BQ9H7F4 350 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 GRPEL1Q9HAV7 217 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 GP6Q9HCN6 339 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 YAE1D1Q9NRH1 226 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 FBXO34Q9NWN3 711 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 KLHL13Q9P2N7 655 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 ING1Q9UK53 422 aaPredicted RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 CCL27Q9Y4X3 112 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 POLR3HQ9Y535 204 aaPredicted RBP10.81□□□□□ -0.68
LIMS2-210ENST00000413578 CR1P17927 2039 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 A0A1W2PQD3 144 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 DPRXA6NFQ7 191 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 ZNF814B7Z6K7 855 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 NPIPB8E9PQR5 432 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 POC1B-GALNT4F8VUJ3 575 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 ADAM11O75078 769 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 RSL1D1O76021 490 aaKnown RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 KCNK2O95069 426 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 NTN1O95631 604 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 TP53P04637 393 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 CD3EP07766 207 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 PABPC4LP0CB38 370 aaKnown RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 PRPS2P11908 318 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 ELK4P28324 431 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 LCN1P31025 176 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 FRKP42685 505 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 MANFP55145 182 aaKnown RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 BSPH1Q075Z2 132 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 KIAA0040Q15053 153 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 SPDYAQ5MJ70 313 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 TEX35Q5T0J7 233 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 PDSS1Q5T2R2 415 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 GTF2IRD2BQ6EKJ0 949 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 C8orf74Q6P047 294 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 ZNF551Q7Z340 670 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 GTF2IRD2Q86UP8 949 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 LCA5Q86VQ0 697 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 TDRPQ86YL5 185 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 SLC22A9Q8IVM8 553 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 TUSC5Q8IXB3 177 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 GATSQ8NAP1 163 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 KBTBD8Q8NFY9 601 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 CDC26Q8NHZ8 85 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 GPR151Q8TDV0 419 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 TMEM158Q8WZ71 300 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 HSD17B8Q92506 261 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 GTPBP3Q969Y2 492 aaKnown RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 ZBED6CLQ96FA7 236 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 EGLN2Q96KS0 407 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 POTEKPQ9BYX7 375 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 COQ10BQ9H8M1 238 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 EQTNQ9NQ60 294 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 GDF2Q9UK05 429 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-210ENST00000413578 SNX8Q9Y5X2 465 aa10.8□□□□□ -0.68
LIMS2-210ENST00000413578 GOLGA8QA0A0J9YX86 632 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 A0A1W2PP18 115 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 CCDC151A5D8V7 595 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 GOLGA8OA6NCC3 632 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 A8MV72 311 aaPredicted RBP10.79□□□□□ -0.68
LIMS2-210ENST00000413578 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 GOLGA8NF8WBI6 632 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 GOLGA8RI6L899 631 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 TBX19O60806 448 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 F12P00748 615 aaPredicted RBP10.79□□□□□ -0.68
LIMS2-210ENST00000413578 ACP2P11117 423 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 ME2P23368 584 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 IL32P24001 234 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 PRIM2P49643 509 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 ZNF41P51814 821 aaPredicted RBP10.79□□□□□ -0.68
LIMS2-210ENST00000413578 CARD18P57730 90 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 FOXF1Q12946 379 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 HSPB3Q12988 150 aa10.79□□□□□ -0.68
LIMS2-210ENST00000413578 P2RY6Q15077 328 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms