RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 POLR2JP52435 117 aaKnown RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 DLX5P56178 289 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 WNT3P56703 355 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 CBFBQ13951 182 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 DAZAP2Q15038 168 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 NNATQ16517 81 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 GRAMD1BQ3KR37 738 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 FAM174BQ3ZCQ3 159 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ACSF3Q4G176 576 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 EIPR1Q53HC9 387 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 DCST2Q5T1A1 773 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 SAXO2Q658L1 398 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 BICRALQ6AI39 1079 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 OR4F3Q6IEY1 312 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ANKRD26P1Q6NSI1 321 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 EIF3MQ7L2H7 374 aaKnown RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 C16orf62Q7Z3J2 963 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 SZRD1Q7Z422 152 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 YRDCQ86U90 279 aaKnown RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 ANKRD46Q86W74 232 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ZNF440Q8IYI8 595 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 SLC43A2Q8N370 569 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 KRTCAP2Q8N6L1 136 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 OR4A15Q8NGL6 344 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 OR5M9Q8NGP3 310 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 OR5W2Q8NH69 310 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 CLHC1Q8NHS4 586 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 FAM222BQ8WU58 562 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ST8SIA1Q92185 356 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 PIK3R3Q92569 461 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 RNASE6Q93091 150 aaKnown RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 SLC35B4Q969S0 331 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 MARVELD3Q96A59 401 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 RMND5BQ96G75 393 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 TRNT1Q96Q11 434 aaKnown RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 OR7D2Q96RA2 312 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 SLC39A3Q9BRY0 314 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 LAT2Q9GZY6 243 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 OR10A4Q9H209 315 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 CXorf36Q9H7Y0 433 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ZNF395Q9H8N7 513 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 ANKRA2Q9H9E1 313 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 GALNT9Q9HCQ5 603 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 EQTNQ9NQ60 294 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 TCF7L2Q9NQB0 619 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 EXOSC3Q9NQT5 275 aaKnown RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 SERINC1Q9NRX5 453 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 ELOVL5Q9NYP7 299 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 JKAMPQ9P055 326 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 MARCOQ9UEW3 520 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 Q9UFV3 132 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 NDRG3Q9UGV2 375 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ZNF232Q9UNY5 417 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 CORO2BQ9UQ03 480 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 CAMK2AQ9UQM7 478 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 SPIN1Q9Y657 262 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 USH1CQ9Y6N9 552 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 USP9YO00507 2555 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 A0A0G2JPF8 293 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 RNF103-CHMP3A0A140T963 221 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 GXYLT2A0PJZ3 443 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 A1L4Q6 167 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 OR2M5A3KFT3 312 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 SERINC4A6NH21 518 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 CCDC154A6NI56 674 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 ENO4A6NNW6 628 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 HNRNPCL2B2RXH8 293 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 HNRNPCL3B7ZW38 293 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 FAAHO00519 579 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 ZNF195O14628 629 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 DNPH1O43598 174 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 HNRNPCL1O60812 293 aaKnown RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 ANP32DO95626 131 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 HNRNPCL4P0DMR1 293 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 TMIGD3P0DMS9 266 aaPredicted RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 CD8BP10966 210 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 POU3F2P20265 443 aaPredicted RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 PAX7P23759 505 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 EPHA3P29320 983 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 CHI3L1P36222 383 aaPredicted RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 APOBEC1P41238 236 aaKnown RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 KHKP50053 298 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 CLDN18P56856 261 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 TFF3Q07654 80 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 FADDQ13158 208 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 RNPS1Q15287 305 aaKnown RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 SGCBQ16585 318 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 FLYWCH1Q4VC44 716 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 HSP90B2PQ58FF3 399 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 SPANXN4Q5MJ08 99 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 NXNQ6DKJ4 435 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 LRRC74BQ6ZQY2 392 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 ZNF621Q6ZSS3 439 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 MARCH3Q86UD3 253 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 GRAMD2AQ8IUY3 354 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 MARVELD2Q8N4S9 558 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 BHLHE22Q8NFJ8 381 aaPredicted RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 SLC25A43Q8WUT9 341 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms