RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ARHGAP11AQ6P4F7 1023 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 MTERF4Q7Z6M4 381 aaKnown RBP12.68□□□□□ -0.38
CPNE1-206ENST00000412056 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 SLC38A5Q8WUX1 472 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 MAL2Q969L2 176 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 LRRC58Q96CX6 371 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 ZG16BQ96DA0 208 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 A4GALTQ9NPC4 353 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 CORO2BQ9UQ03 480 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 ZNF835Q9Y2P0 537 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 SLC6A5Q9Y345 797 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 L3MBTL1Q9Y468 752 aa12.68□□□□□ -0.38
CPNE1-206ENST00000412056 DIDO1Q9BTC0 2240 aaKnown RBP12.68□□□□□ -0.38
CPNE1-206ENST00000412056 DSPPQ9NZW4 1301 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 SERINC4A6NH21 518 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 NPIPA2E9PIF3 369 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 NPIPA3F8WFD2 350 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 AQP7O14520 342 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 HCRTR2O43614 444 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 SUSD5O60279 629 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 SLC19A2O60779 497 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 RPS4Y1P22090 263 aaKnown RBP12.67□□□□□ -0.38
CPNE1-206ENST00000412056 DPP4P27487 766 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 PTGS2P35354 604 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 CRISP3P54108 245 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 C3AR1Q16581 482 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 AP1ARQ63HQ0 302 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 CBLN3Q6UW01 205 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 Q6ZPB1 254 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-206ENST00000412056 MISPQ8IVT2 679 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 PCYOX1LQ8NBM8 494 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 OR14L1PQ8NHC6 308 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 NFKBIDQ8NI38 313 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 FAM57AQ8TBR7 257 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 C1GALT1C1Q96EU7 318 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 THUMPD3Q9BV44 507 aaKnown RBP12.67□□□□□ -0.38
CPNE1-206ENST00000412056 THUMPD1Q9NXG2 353 aaKnown RBP12.67□□□□□ -0.38
CPNE1-206ENST00000412056 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 TINAGQ9UJW2 476 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 RPH3AQ9Y2J0 694 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-206ENST00000412056 SMG1Q96Q15 3661 aaKnown RBP12.67□□□□□ -0.38
CPNE1-206ENST00000412056 KIAA1549Q9HCM3 1950 aa12.67□□□□□ -0.38
CPNE1-206ENST00000412056 C15orf38-AP3S2A0A0A6YYH1 394 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 TRGV8A0A0C4DH27 118 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 TMEM247A6NEH6 219 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 AGAP5A6NIR3 686 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 CLDN24A6NM45 220 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 H3BNH8 94 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 GTPBP1O00178 669 aaKnown RBP12.66□□□□□ -0.38
CPNE1-206ENST00000412056 ZIC3O60481 467 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 BCAS1O75363 584 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-206ENST00000412056 CSTAP01040 98 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 TPOP07202 933 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 STSP08842 583 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 UBL4AP11441 157 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 HK1P19367 917 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 DSCR4P56555 118 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-206ENST00000412056 PLAURQ03405 335 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 CRYZQ08257 329 aaKnown RBP12.66□□□□□ -0.38
CPNE1-206ENST00000412056 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 ZNF630Q2M218 657 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-206ENST00000412056 RABL3Q5HYI8 236 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 DCST1Q5T197 706 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 C1QL3Q5VWW1 255 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 NANOGP8Q6NSW7 305 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 ARSKQ6UWY0 536 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 CD163Q86VB7 1156 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 PTOV1Q86YD1 416 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 B4GALNT2Q8NHY0 566 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 ARSGQ96EG1 525 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 DTNBP1Q96EV8 351 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 TREX2Q9BQ50 279 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-206ENST00000412056 PTGES2Q9H7Z7 377 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 NANOGQ9H9S0 305 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 TAS2R10Q9NYW0 307 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 CALML5Q9NZT1 146 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 SUCOQ9UBS9 1254 aaKnown RBP12.66□□□□□ -0.38
CPNE1-206ENST00000412056 CARD8Q9Y2G2 431 aa12.66□□□□□ -0.38
CPNE1-206ENST00000412056 NCOA6Q14686 2063 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-206ENST00000412056 OR14I1A6ND48 311 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 AIM2O14862 343 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 ZNF264O43296 627 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 CYP7B1O75881 506 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 DCTN3O75935 186 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 BMP7P18075 431 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 MSX1P28360 303 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 PRDX6P30041 224 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 PGM1P36871 562 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 P2RX1P51575 399 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 CDK6Q00534 326 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 GANABQ14697 944 aaKnown RBP12.65□□□□□ -0.38
CPNE1-206ENST00000412056 ADRM1Q16186 407 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 CYP51A1Q16850 503 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-206ENST00000412056 IFNEQ86WN2 208 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 VRK2Q86Y07 508 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 TMCO5AQ8N6Q1 288 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 CCDC197Q8NCU1 140 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 OR8J3Q8NGG0 315 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms