RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 GCM2O75603 506 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NTN1O95631 604 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 IFNA2P01563 188 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NGFRP08138 427 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 IL32P24001 234 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GPC1P35052 558 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 MAP3K8P41279 467 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PRKAG1P54619 331 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CKAP4Q07065 602 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TAB1Q15750 504 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PLPPR5Q32ZL2 321 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GLE1Q53GS7 698 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TMEM201Q5SNT2 666 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NOXRED1Q6NXP6 359 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PODNL1Q6PEZ8 512 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NUFIP2Q7Z417 695 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 LILRA2Q8N149 483 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GABRG1Q8N1C3 465 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 C17orf53Q8N3J3 647 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CCNYL1Q8N7R7 359 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FAM76AQ8TAV0 307 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 POC1BQ8TC44 478 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ACTRT2Q8TDY3 377 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 EGLN2Q96KS0 407 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FMO2Q99518 471 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SLCO5A1Q9H2Y9 848 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GSTO2Q9H4Y5 243 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 MAGED1Q9Y5V3 778 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 A0A1W2PP18 115 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TLX2O43763 284 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CD5LO43866 347 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 IFI6P09912 130 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 HPGDP15428 266 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SFTPDP35247 375 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FAPQ12884 760 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SFRP5Q5T4F7 317 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ANKRD26P1Q6NSI1 321 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 IKBIPQ70UQ0 350 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SZRD1Q7Z422 152 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TRIM46Q7Z4K8 759 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZAR1Q86SH2 424 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TRABD2AQ86V40 505 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 LCA5Q86VQ0 697 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 HIPK1Q86Z02 1210 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TUSC5Q8IXB3 177 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CDRT4Q8N9R6 151 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NUP43Q8NFH3 380 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CEP70Q8NHQ1 597 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FBXO30Q8TB52 745 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FAM110BQ8TC76 370 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ABHD3Q8WU67 409 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 HSD17B8Q92506 261 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 KLHL15Q96M94 604 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 KLHDC3Q9BQ90 382 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SNX8Q9Y5X2 465 aa12.68□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GOLGA8RI6L899 631 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PDPK1O15530 556 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NDUFS7O75251 213 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SEC22BO75396 215 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CRCPO75575 148 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 RSL1D1O76021 490 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 KCNK2O95069 426 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ADAP00813 363 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 IGHV4-39P01824 125 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ACP2P11117 423 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ADH6P28332 368 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GCAP28676 217 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SHC1P29353 583 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 BSPH1Q075Z2 132 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 RNPS1Q15287 305 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZNF239Q16600 458 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZNF672Q499Z4 452 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TFAP2EQ6VUC0 442 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ATG4DQ86TL0 474 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PHC2Q8IXK0 858 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SLC16A11Q8NCK7 471 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 KBTBD8Q8NFY9 601 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 OR6Y1Q8NGX8 325 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 RNF128Q8TEB7 428 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ANP32BQ92688 251 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CIDECQ96AQ7 238 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZBED6CLQ96FA7 236 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TIGARQ9NQ88 270 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 RRAGDQ9NQL2 400 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 UBQLN4Q9NRR5 601 aa12.67□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SCDO00767 359 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 EFNA2O43921 213 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ADAM11O75078 769 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PRKD3O94806 890 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FESP07332 822 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GSTA1P08263 222 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 LINGO3P0C6S8 592 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ECHS1P30084 290 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms