RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 EEF1A2Q05639 463 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PDZK1IP1Q13113 114 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 HERC3Q15034 1050 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CHRNA6Q15825 494 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CPSF6Q16630 551 aaKnown RBP eCLIP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 VWC2Q2TAL6 325 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ATP13A5Q4VNC0 1218 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TEX30Q5JUR7 227 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 HENMT1Q5T8I9 393 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 N4BP2L1Q5TBK1 243 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PRAMEF20Q5VT98 475 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 EEF1A1P5Q5VTE0 462 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 IRAK1BP1Q5VVH5 260 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ANKRD22Q5VYY1 191 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TMEM198Q66K66 360 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 WBP2NLQ6ICG8 309 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ZFP1Q6P2D0 407 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CCDC137Q6PK04 289 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 FAM151BQ6UXP7 276 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ETV3LQ6ZN32 361 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ZBTB49Q6ZSB9 765 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 GPRIN3Q6ZVF9 776 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 UTS2BQ765I0 119 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PRSS42Q7Z5A4 293 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ZAR1Q86SH2 424 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CARM1Q86X55 608 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 STX12Q86Y82 276 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 MARCH9Q86YJ5 346 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SIAH3Q8IW03 269 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 KLHDC8BQ8IXV7 354 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SRRM1Q8IYB3 904 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 AMER2Q8N7J2 671 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PNPLA1Q8N8W4 532 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 KYQ8NBH2 561 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CLEC1AQ8NC01 280 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SETD9Q8NE22 299 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 DNAAF1Q8NEP3 725 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 OR4K2Q8NGD2 314 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 OR56A4Q8NGH8 313 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 OR5H6Q8NGV6 325 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 OR6F1Q8NGZ6 308 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 MYDGFQ969H8 173 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 YIPF5Q969M3 257 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 NXNL1Q96CM4 212 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 OMA1Q96E52 524 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 C19orf60Q96EN9 201 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 RNF170Q96K19 258 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TMEM68Q96MH6 324 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 QRFPRQ96P65 431 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TRIB1Q96RU8 372 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PTDSS2Q9BVG9 487 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TEX101Q9BY14 249 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 YTHDF1Q9BYJ9 559 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 FRMD8P1Q9BZ68 369 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SLCO5A1Q9H2Y9 848 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 VCX2Q9H322 139 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SRD5A3Q9H8P0 318 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 NANOGQ9H9S0 305 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF556Q9HAH1 456 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 HMG20AQ9NP66 347 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 IL26Q9NPH9 171 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PHPT1Q9NRX4 125 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 NKIRAS1Q9NYS0 192 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 GRHL1Q9NZI5 618 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PAK5Q9P286 719 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 BCAP29Q9UHQ4 241 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SLC24A2Q9UI40 661 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 DAPK2Q9UIK4 370 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CNOT6Q9ULM6 557 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 AAR2Q9Y312 384 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 AP4B1Q9Y6B7 739 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PMF1-BGLAPU3KQ54 211 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SCN8AQ9UQD0 1980 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 LRP4O75096 1905 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 LY6G6EA0A0G2JKS1 128 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 GLYATL1P3A0A0U1RQE8 302 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 A0A0X1KG70 313 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 LOC100653049A0A140TA62 436 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 A0A1W2PPM1 405 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 A0A1W2PQ72 361 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 LOC390937A0A1W2PQ73 354 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ARGFXA6NJG6 315 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF716A6NP11 495 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 LEUTXA8MZ59 168 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 B4DGG1 531 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 F8W036 122 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 H3BMM5 538 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DNALI1O14645 258 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 HS3ST1O14792 307 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 STX7O15400 261 aaKnown RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 LDB2O43679 373 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 DFNA5O60443 496 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 BANF1O75531 89 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 KRT34O76011 436 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 WNT11O96014 354 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 EPOP01588 193 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 HEXAP06865 529 aa4.24□□□□□ -1.73
SF3B1-202ENST00000409915 F7P08709 466 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-202ENST00000409915 ZGLP1P0C6A0 271 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms