RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MARCH9Q86YJ5 346 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 GPR135Q8IZ08 494 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 SPAG16Q8N0X2 631 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 THEM5Q8N1Q8 247 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 TMEM86AQ8N2M4 240 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 TEX19Q8NA77 164 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC5A11Q8WWX8 675 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 TMEM203Q969S6 136 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 GTPBP3Q969Y2 492 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 PNPLA2Q96AD5 504 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 TMEM41AQ96HV5 264 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 FCRL2Q96LA5 508 aaPredicted RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ASB16Q96NS5 453 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 IL4I1Q96RQ9 567 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ZYG11BQ9C0D3 744 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 EGLN1Q9GZT9 426 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 BRD9Q9H8M2 597 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 BARX1Q9HBU1 254 aaPredicted RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC6A20Q9NP91 592 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF624Q9P2J8 865 aaPredicted RBP9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 SCN8AQ9UQD0 1980 aa9.96□□□□□ -0.82
NIF3L1-204ENST00000409357 EP300Q09472 2414 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ARGFXA6NJG6 315 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ARHGEF33A8MVX0 844 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 MCIDASD6RGH6 385 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 RNASET2O00584 256 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 MAN2B1O00754 1011 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 PHYHO14832 338 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TO15178 435 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 EEF1E1O43324 174 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 FZD7O75084 574 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 NIPSNAP2O75323 286 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 RPA2P15927 270 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ASMTP46597 345 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 LHX1P48742 406 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 DGKGP49619 791 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 CDK5Q00535 292 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 NHLH1Q02575 133 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 RING1Q06587 406 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 SNTB2Q13425 540 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 EIF2S3LQ2VIR3 472 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 GCNT6Q5T4J0 391 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 HAGHLQ6PII5 290 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 PAQR6Q6TCH4 344 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 VITQ6UXI7 678 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TMIGD1Q6UXZ0 262 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 CERS6Q6ZMG9 384 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 GLDNQ6ZMI3 551 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 MTSS1LQ765P7 747 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TMEM150AQ86TG1 271 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 SIAH3Q8IW03 269 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 OR52N2Q8NGI0 321 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TRMT2BQ96GJ1 504 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ZDHHC12Q96GR4 267 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF582Q96NG8 517 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 LRRC3BQ96PB8 259 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 RBM14Q96PK6 669 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TSSK3Q96PN8 268 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ABHD1Q96SE0 405 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ACBD6Q9BR61 282 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 FUZQ9BT04 418 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 GSDMCQ9BYG8 508 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 FOXQ1Q9C009 403 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 SMG9Q9H0W8 520 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 WDR26Q9H7D7 661 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TBC1D17Q9HA65 648 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 GPN1Q9HCN4 374 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 EXOSC3Q9NQT5 275 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC2A4RGQ9NR83 387 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ZFP57Q9NU63 452 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TMEM30AQ9NV96 361 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ELOVL2Q9NXB9 296 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 TAS2R5Q9NYW4 299 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 WNT16Q9UBV4 365 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 CAMK2AQ9UQM7 478 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 ERVK-19Q9WJR5 959 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 NPFFR2Q9Y5X5 522 aa9.95□□□□□ -0.82
NIF3L1-204ENST00000409357 GPR179Q6PRD1 2367 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 IGLV3-10A0A075B6K4 115 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 SHISA7A6NL88 538 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 C2orf74A8MZ97 194 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 LRRN3E7EW58 273 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 CLDN5O00501 218 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 IMPA2O14732 288 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 LCMT2O60294 686 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 CDC123O75794 336 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 PRAMEF12O95522 483 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 SERPINA3P01011 423 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 PDYNP01213 254 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 HPXP02790 462 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 IFNW1P05000 195 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 GLAP06280 429 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 USP17L7P0C7H9 530 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 LIMS3P0CW19 117 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 LIMS4P0CW20 117 aa9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 HMGA1P17096 107 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 PSMB1P20618 241 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-204ENST00000409357 TACR1P25103 407 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms