RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PTPN2P17706 415 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 AHCYP23526 432 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 WDR45BQ5MNZ6 344 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 LHX8Q68G74 356 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 FAAH2Q6GMR7 532 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 PRR22Q8IZ63 422 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 FATE1Q969F0 183 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 EFHD2Q96C19 240 aaPredicted RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 TMEM175Q9BSA9 504 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 CCDC32Q9BV29 185 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 METTL17Q9H7H0 456 aaPredicted RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 C3orf14Q9HBI5 128 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 ADAM18Q9Y3Q7 739 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 AHCTF1Q8WYP5 2266 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 CDC14CA4D256 554 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 OR6C74A6NCV1 312 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 GPANK1O95872 356 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 PRNPP04156 253 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 ZNF30P17039 623 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 RPL3P39023 403 aaKnown RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 MMP12P39900 470 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 EIF1AXP47813 144 aaKnown RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 MAZP56270 477 aaKnown RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 SMIM11AP58511 58 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 PRR5P85299 388 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 SHC2P98077 582 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 CRMP1Q14194 572 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 EIF4HQ15056 248 aaKnown RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 PDGFRLQ15198 375 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 SLX4IPQ5VYV7 408 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 XKRXQ6PP77 449 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 Q6ZNB5 142 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 HTR3DQ70Z44 454 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 CCDC28AQ8IWP9 274 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 PLPP6Q8IY26 295 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 NATD1Q8N6N6 113 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 FBXO15Q8NCQ5 510 aaPredicted RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 C17orf47Q8NEP4 570 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 PROKR2Q8NFJ6 384 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 OR4C6Q8NH72 309 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 AMDHD1Q96NU7 426 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 DERL3Q96Q80 235 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 OR14A2Q96R54 314 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 OR52D1Q9H346 318 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 MYNNQ9NPC7 610 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 POT1Q9NUX5 634 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 MKL2Q9ULH7 1088 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 RCE1Q9Y256 329 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 BACE2Q9Y5Z0 518 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 CFAP54Q96N23 3096 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 A0A0A6YYJ9 748 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 ARPC1BO15143 372 aaKnown RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 PRODHO43272 600 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 OR3A3P47888 321 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 MLLT11Q13015 90 aaPredicted RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 BTN1A1Q13410 526 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 TCEAL8Q8IYN2 117 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 OR52B4Q8NGK2 314 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 DVL3Q92997 716 aaPredicted RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 SLC25A36Q96CQ1 311 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 GAL3ST4Q96RP7 486 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 MS4A7Q9GZW8 240 aaPredicted RBP7.78□□□□□ -1.16
SNX13-201ENST00000409076 BRF2Q9HAW0 419 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 ADAM30Q9UKF2 790 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 KNTC1P50748 2209 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 IGHA2P01877 340 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 LIMS3P0CW19 117 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 LIMS4P0CW20 117 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 HPGDP15428 266 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 LAG3P18627 525 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 IFNGR2P38484 337 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 AKR1C2P52895 323 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 AKR1C1Q04828 323 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 ST3GAL3Q11203 375 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 ILKQ13418 452 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 TRAM2Q15035 370 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 GFOD2Q3B7J2 385 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 OAFQ86UD1 273 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 COMMD7Q86VX2 200 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 PEX5LQ8IYB4 626 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 OR2T33Q8NG76 320 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 OR52E1Q8NGJ3 308 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 MS4A3Q96HJ5 214 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 NARFLQ9H6Q4 476 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 CD93Q9NPY3 652 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 MARK1Q9P0L2 795 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 HCN3Q9P1Z3 774 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 SLC6A5Q9Y345 797 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 C4orf51C9J302 202 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 TNFRSF10AO00220 468 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 EIF1AYO14602 144 aaKnown RBP7.77□□□□□ -1.17
SNX13-201ENST00000409076 ARPC5O15511 151 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 ZNF780AO75290 641 aaPredicted RBP7.77□□□□□ -1.17
SNX13-201ENST00000409076 GABRB1P18505 474 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 STOMP27105 288 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 ITPKBP27987 946 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 MPIP34949 423 aa7.77□□□□□ -1.17
SNX13-201ENST00000409076 VEGFCP49767 419 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms