RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 NUBPLQ8TB37 319 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 SLC39A7Q92504 469 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 DIO2Q92813 273 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 VMP1Q96GC9 406 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 HS6ST2Q96MM7 605 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 MBOAT4Q96T53 435 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 FEVQ99581 238 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 SPSB2Q99619 263 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 LPAR4Q99677 370 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 PITX2Q99697 317 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 MCHR1Q99705 422 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 APOL4Q9BPW4 351 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 ZNF559Q9BR84 538 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 NUDT9Q9BW91 350 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 OR8D2Q9GZM6 311 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 APMAPQ9HDC9 416 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 PAPOLBQ9NRJ5 636 aaKnown RBP9.05□□□□□ -0.96
POLR1A-202ENST00000409024 UBQLN4Q9NRR5 601 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 TUBA8Q9NY65 449 aaPredicted RBP9.05□□□□□ -0.96
POLR1A-202ENST00000409024 UBAP1Q9NZ09 502 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 NDRG4Q9ULP0 352 aaKnown RBP9.05□□□□□ -0.96
POLR1A-202ENST00000409024 MYRFQ9Y2G1 1151 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 RAXQ9Y2V3 346 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 CHST2Q9Y4C5 530 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 LOXL2Q9Y4K0 774 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 AK5Q9Y6K8 562 aa9.05□□□□□ -0.96
POLR1A-202ENST00000409024 A0A1W2PQ72 361 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 A0A1W2PQD3 144 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 TRAPPC13A5PLN9 417 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 OR2W5A6NFC9 320 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 TRIM64A6NGJ6 449 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 A8MUA0 341 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 H3BNH8 94 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 M0R3H8 397 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 ABCB7O75027 752 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 SEMA7AO75326 666 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 MT-CO3P00414 261 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 CCL4P13236 92 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 TBXA2RP21731 343 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 YAP1P46937 504 aaKnown RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 UGT2B15P54855 530 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 NUP107P57740 925 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 CXCR4P61073 352 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 ALDH6A1Q02252 535 aaKnown RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 PIN1Q13526 163 aaPredicted RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 MAPK14Q16539 360 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 KLHL26Q53HC5 615 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 ENTPD8Q5MY95 495 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 MRPL2Q5T653 305 aaKnown RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 TMEM164Q5U3C3 297 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 ZNF691Q5VV52 312 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 C1orf94Q6P1W5 598 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 TTC33Q6PID6 262 aaPredicted RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 RAB11FIP2Q7L804 512 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 CPEB2Q7Z5Q1 589 aaKnown RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 LACC1Q8IV20 430 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 HS3ST5Q8IZT8 346 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 SLC34A3Q8N130 599 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 CLIP4Q8N3C7 705 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 SLC5A8Q8N695 610 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 SLC15A4Q8N697 577 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 LSMEM1Q8N8F7 131 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 FBLIM1Q8WUP2 373 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 ACOT11Q8WXI4 607 aaPredicted RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 MPP4Q96JB8 637 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 HRASLS5Q96KN8 279 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 BARD1Q99728 777 aaKnown RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 CRB3Q9BUF7 120 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 ULBP3Q9BZM4 244 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 TRIM2Q9C040 744 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 WWTR1Q9GZV5 400 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 QRSL1Q9H0R6 528 aaKnown RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 TMEM27Q9HBJ8 222 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 EXOSC3Q9NQT5 275 aaKnown RBP9.04□□□□□ -0.96
POLR1A-202ENST00000409024 PIEZO2Q9H5I5 2752 aa9.04□□□□□ -0.96
POLR1A-202ENST00000409024 SERINC4A6NH21 518 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 SCDO00767 359 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 BCKDKO14874 412 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 OR10H3O60404 316 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MPZL2O60487 215 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MRPS14O60783 128 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 NME6O75414 186 aaPredicted RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 C1QL1O75973 258 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 DKK1O94907 266 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 IGKV1D-16P01601 117 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 JMJD7P0C870 316 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 OSMP13725 252 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 HPGDP15428 266 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 ZNF136P52737 540 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 EFNA3P52797 238 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 TPD52P55327 224 aaPredicted RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 NRG3P56975 720 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 TUBA4AP68366 448 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 RNF4P78317 190 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MYBPC1Q00872 1141 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 PPP1R8Q12972 351 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 EFR3AQ14156 821 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 GANABQ14697 944 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 NCF4Q15080 339 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms